RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 CLEC17AQ6ZS10 378 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 C4orf32Q8N8J7 132 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 DNERQ8NFT8 737 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 CD99L2Q8TCZ2 262 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 MORC4Q8TE76 937 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 NSUN6Q8TEA1 469 aaKnown RBP7.1□□□□□ -1.27
SCFD1-212ENST00000554486 MBOAT7Q96N66 472 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 CDADC1Q9BWV3 514 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 NOL7Q9UMY1 257 aaKnown RBP7.1□□□□□ -1.27
SCFD1-212ENST00000554486 ATP6V1DQ9Y5K8 247 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 CLIC4Q9Y696 253 aa7.1□□□□□ -1.27
SCFD1-212ENST00000554486 IGLV3-22A0A075B6J6 115 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 SSU72P8A0A1W2PR75 194 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 ESYT3A0FGR9 886 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 LRRC10BA6NIK2 292 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 FAM86B1E9PN63 330 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 TNPO2O14787 897 aaKnown RBP7.09□□□□□ -1.27
SCFD1-212ENST00000554486 SLC37A4O43826 429 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 SNRPB2P08579 225 aaKnown RBP7.09□□□□□ -1.27
SCFD1-212ENST00000554486 HOXC6P09630 235 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 FAM86B2P0C5J1 330 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 GCFC2P16383 781 aaKnown RBP7.09□□□□□ -1.27
SCFD1-212ENST00000554486 CCND2P30279 289 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 MCM7P33993 719 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 ERVFC1P60507 584 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 LETM2Q2VYF4 491 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 ANO1Q5XXA6 986 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 MBLAC2Q68D91 279 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 ATL3Q6DD88 541 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 PPP4R3AQ6IN85 833 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 XRRA1Q6P2D8 792 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 MOXD1Q6UVY6 613 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 DPP9Q86TI2 863 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 CCDC103Q8IW40 242 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 LINC00301Q8NCQ3 95 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 CYP2W1Q8TAV3 490 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 SOCS4Q8WXH5 440 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 LENG9Q96B70 501 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 MAP6Q96JE9 813 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 FCRL2Q96LA5 508 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-212ENST00000554486 ZNF396Q96N95 335 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-212ENST00000554486 PTCHD1Q96NR3 888 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 IWS1Q96ST2 819 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 SLC38A3Q99624 504 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 TMEM60Q9H2L4 133 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 RTEL1Q9NZ71 1219 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 GABRQQ9UN88 632 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 CNPY2Q9Y2B0 182 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 UBIAD1Q9Y5Z9 338 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 HTTP42858 3142 aa7.09□□□□□ -1.27
SCFD1-212ENST00000554486 DOCK5Q9H7D0 1870 aa7.09□□□□□ -1.28
SCFD1-212ENST00000554486 LOC102724159A0A0B4J2E5 919 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 FADS2P1A8MWK0 482 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 CCNT1O60563 726 aaKnown RBP7.08□□□□□ -1.28
SCFD1-212ENST00000554486 YEATS4O95619 227 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 C6orf222P0C671 652 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-212ENST00000554486 MYCLP12524 364 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-212ENST00000554486 PLS3P13797 630 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 NCLP19338 710 aaKnown RBP7.08□□□□□ -1.28
SCFD1-212ENST00000554486 ECI1P42126 302 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 FLT3LGP49771 235 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 KRT85P78386 507 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 ATP2C1P98194 919 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-212ENST00000554486 CEBPZQ03701 1054 aaKnown RBP7.08□□□□□ -1.28
SCFD1-212ENST00000554486 PRKCZQ05513 592 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 MAP4K2Q12851 820 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 ORC2Q13416 577 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-212ENST00000554486 KIF22Q14807 665 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 SLC39A14Q15043 492 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 PWP2Q15269 919 aaKnown RBP7.08□□□□□ -1.28
SCFD1-212ENST00000554486 TESK1Q15569 626 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 CCL14Q16627 93 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 Q4G0T1 1027 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 CEP55Q53EZ4 464 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 PRR16Q569H4 304 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 EEF1DP3Q658K8 133 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 MPZL3Q6UWV2 235 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 NIPA1Q7RTP0 329 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 KSR1Q8IVT5 923 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 LEO1Q8WVC0 666 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-212ENST00000554486 HAS1Q92839 578 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 ERO1AQ96HE7 468 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 MAML3Q96JK9 1138 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 CCDC140Q96MF4 163 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 INPP4AQ96PE3 977 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-212ENST00000554486 MTMR9Q96QG7 549 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 MXRA8Q9BRK3 442 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 JADE2Q9NQC1 790 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 FLRT1Q9NZU1 646 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 CLEC1BQ9P126 229 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 ADD3Q9UEY8 706 aaKnown RBP7.08□□□□□ -1.28
SCFD1-212ENST00000554486 DDX25Q9UHL0 483 aaKnown RBP7.08□□□□□ -1.28
SCFD1-212ENST00000554486 RCOR1Q9UKL0 485 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 CFAP45Q9UL16 551 aa7.08□□□□□ -1.28
SCFD1-212ENST00000554486 MORC2Q9Y6X9 1032 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-212ENST00000554486 BLACEA4D250 179 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 ASB14A6NK59 587 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 MSH4O15457 936 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 FIBPO43427 364 aa7.07□□□□□ -1.28
SCFD1-212ENST00000554486 NEMFO60524 1076 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms