RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 SOD2P04179 222 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 ALDH2P05091 517 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 MYBP10242 640 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 CD72P21854 359 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 FGFR4P22455 802 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 TMOD1P28289 359 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 SMARCA1P28370 1054 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 RPS9P46781 194 aaKnown RBP7.74□□□□□ -1.17
ATXN3-224ENST00000554040 CLCN3P51790 818 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 AK2P54819 239 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 RNASELQ05823 741 aaKnown RBP7.74□□□□□ -1.17
ATXN3-224ENST00000554040 CSRP2Q16527 193 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 LPAL2Q16609 132 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 CEP55Q53EZ4 464 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 ANKRD45Q5TZF3 282 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 LAIR1Q6GTX8 287 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 SWSAP1Q6NVH7 229 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 EFCAB12Q6NXP0 572 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 PARM1Q6UWI2 310 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 GLB1LQ6UWU2 654 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 CATIPQ7Z7H3 387 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 ZNF280BQ86YH2 543 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 LINC01465Q8N7H1 131 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 FGF14Q92915 247 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 LPPQ93052 612 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 RILPL2Q969X0 211 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 RPS6KC1Q96S38 1066 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 MAP7D2Q96T17 732 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 NELL2Q99435 816 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 FAM83CQ9BQN1 747 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 SPZ1Q9BXG8 430 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 PLEKHA4Q9H4M7 779 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 PIDD1Q9HB75 910 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 SEMA4GQ9NTN9 838 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 DNAJB4Q9UDY4 337 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 SEC63Q9UGP8 760 aaKnown RBP7.74□□□□□ -1.17
ATXN3-224ENST00000554040 SSX2IPQ9Y2D8 614 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 SPEGQ15772 3267 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 IGF2RP11717 2491 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 DOCK8Q8NF50 2099 aa7.74□□□□□ -1.17
ATXN3-224ENST00000554040 DENND4AQ7Z401 1863 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 MEIS1O00470 390 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 GAS2O43903 313 aaKnown RBP7.73□□□□□ -1.17
ATXN3-224ENST00000554040 C1RP00736 705 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 TDGF1P13385 188 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 KIF5BP33176 963 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 GPC3P51654 580 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 PFKPQ01813 784 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 FZD5Q13467 585 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 UBE2SQ16763 222 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 LONRF3Q496Y0 759 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 ANKRD34AQ69YU3 496 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 MIS18BP1Q6P0N0 1132 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 CWC27Q6UX04 472 aaKnown RBP7.73□□□□□ -1.17
ATXN3-224ENST00000554040 GET4Q7L5D6 327 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-224ENST00000554040 TAS1R1Q7RTX1 841 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 CKAP2LQ8IYA6 745 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 SLC7A3Q8WY07 619 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 PHKBQ93100 1093 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 ZNF668Q96K58 619 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-224ENST00000554040 MAP3K14Q99558 947 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 LZTS2Q9BRK4 669 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 MYL10Q9BUA6 226 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 GBP3Q9H0R5 595 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 RXFP1Q9HBX9 757 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 ZDHHC7Q9NXF8 308 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 FOXD3Q9UJU5 478 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-224ENST00000554040 CDH7Q9ULB5 785 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 CEP131Q9UPN4 1083 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 INPP5FQ9Y2H2 1132 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 FAN1Q9Y2M0 1017 aa7.73□□□□□ -1.17
ATXN3-224ENST00000554040 ERICH2A1L162 156 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 MEGF11A6BM72 1044 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 MEIS3P2A8K0S8 358 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 DDX39AO00148 427 aaKnown RBP7.72□□□□□ -1.17
ATXN3-224ENST00000554040 NRP1O14786 923 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 FZD6O60353 706 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 B4GALT3O60512 393 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 FOXD2O60548 495 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-224ENST00000554040 ZNF623O75123 536 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 CSDE1O75534 798 aaKnown RBP7.72□□□□□ -1.17
ATXN3-224ENST00000554040 DDHD2O94830 711 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 DLGAP3O95886 979 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 URODP06132 367 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 SPATA31D3P0C874 917 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 PCSK2P16519 638 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 TRDNQ13061 729 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 MTAPQ13126 283 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 PEAR1Q5VY43 1037 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-224ENST00000554040 IL31Q6EBC2 164 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 LILRA6Q6PI73 481 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 ZNF852Q6ZMS4 543 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 SPATA31D4Q6ZUB0 917 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 MTSS1LQ765P7 747 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 TRMT1LQ7Z2T5 733 aaKnown RBP7.72□□□□□ -1.17
ATXN3-224ENST00000554040 LRRC71Q8N4P6 559 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 SRBD1Q8N5C6 995 aaKnown RBP7.72□□□□□ -1.17
ATXN3-224ENST00000554040 PMEPA1Q969W9 287 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 TMEM175Q9BSA9 504 aa7.72□□□□□ -1.17
ATXN3-224ENST00000554040 RUSC1Q9BVN2 902 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms