RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 WDR4P57081 412 aaKnown RBP12.85□□□□□ -0.35
SPTB-206ENST00000553938 CUL3Q13618 768 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 TKFCQ3LXA3 575 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 ZNF394Q53GI3 561 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 ECHDC2Q86YB7 292 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 HAPLN2Q9GZV7 340 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 RASAL2Q9UJF2 1139 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 NAALADL1Q9UQQ1 740 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 ZNF862O60290 1169 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 HARSP12081 509 aaKnown RBP12.85□□□□□ -0.35
SPTB-206ENST00000553938 MAPK4P31152 587 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 INTS8Q75QN2 995 aaKnown RBP12.85□□□□□ -0.35
SPTB-206ENST00000553938 FBXO41Q8TF61 875 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 TGS1Q96RS0 853 aaKnown RBP12.85□□□□□ -0.35
SPTB-206ENST00000553938 GLT8D2Q9H1C3 349 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 CNOT10Q9H9A5 744 aaKnown RBP12.85□□□□□ -0.35
SPTB-206ENST00000553938 TJP2Q9UDY2 1190 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 WDR91A4D1P6 747 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 C2orf71A6NGG8 1288 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 THAP12O43422 761 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 DNAJC8O75937 253 aaPredicted RBP12.85□□□□□ -0.35
SPTB-206ENST00000553938 AGTP01019 485 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 PLS3P13797 630 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 GCAP28676 217 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 BLMHQ13867 455 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 TAS1R3Q7RTX0 852 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 CLEC4DQ8WXI8 215 aa12.85□□□□□ -0.35
SPTB-206ENST00000553938 RANBP17Q9H2T7 1088 aaKnown RBP12.85□□□□□ -0.35
SPTB-206ENST00000553938 MTRF1LQ9UGC7 380 aaKnown RBP12.85□□□□□ -0.35
SPTB-206ENST00000553938 THSD7AQ9UPZ6 1657 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 POC1B-GALNT4F8VUJ3 575 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 CYP1A2P05177 515 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 GM2AP17900 193 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 MPP3Q13368 585 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 STRIP1Q5VSL9 837 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 TTC30BQ8N4P2 665 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 TMEM161BQ8NDZ6 487 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 PRR11Q96HE9 360 aaPredicted RBP12.84□□□□□ -0.35
SPTB-206ENST00000553938 ZNF341Q9BYN7 854 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 LNPEPQ9UIQ6 1025 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 GGA2Q9UJY4 613 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 TMX2Q9Y320 296 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 CNTNAP1P78357 1384 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 hCG_2014768A0A024R1R8 64 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 A0A1W2PPM1 405 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 GOLGA8RI6L899 631 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 TARSP26639 723 aaKnown RBP12.84□□□□□ -0.35
SPTB-206ENST00000553938 NOP14P78316 857 aaKnown RBP12.84□□□□□ -0.35
SPTB-206ENST00000553938 CALCOCO2Q13137 446 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 C6orf118Q5T5N4 469 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 PRAMEF18Q5VWM3 479 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 MTHFD1LQ6UB35 978 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 PODNQ7Z5L7 613 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 DDX27Q96GQ7 796 aaKnown RBP12.84□□□□□ -0.35
SPTB-206ENST00000553938 SLC5A4Q9NY91 659 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 MYPNQ86TC9 1320 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 PASKQ96RG2 1323 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 COL4A5P29400 1685 aa12.84□□□□□ -0.35
SPTB-206ENST00000553938 FUT4P22083 530 aa12.83□□□□□ -0.35
SPTB-206ENST00000553938 CDR2Q01850 454 aa12.83□□□□□ -0.35
SPTB-206ENST00000553938 FSTL1Q12841 308 aa12.83□□□□□ -0.35
SPTB-206ENST00000553938 ORC1Q13415 861 aa12.83□□□□□ -0.35
SPTB-206ENST00000553938 CYP1B1Q16678 543 aa12.83□□□□□ -0.35
SPTB-206ENST00000553938 ANKMY2Q8IV38 441 aa12.83□□□□□ -0.35
SPTB-206ENST00000553938 GALNT15Q8N3T1 639 aa12.83□□□□□ -0.35
SPTB-206ENST00000553938 CXorf38Q8TB03 319 aa12.83□□□□□ -0.35
SPTB-206ENST00000553938 ACCSQ96QU6 501 aa12.83□□□□□ -0.35
SPTB-206ENST00000553938 TRAIPQ9BWF2 469 aa12.83□□□□□ -0.35
SPTB-206ENST00000553938 DCLK3Q9C098 648 aa12.83□□□□□ -0.35
SPTB-206ENST00000553938 NOP53Q9NZM5 478 aaKnown RBP12.83□□□□□ -0.35
SPTB-206ENST00000553938 LARSQ9P2J5 1176 aaKnown RBP12.83□□□□□ -0.35
SPTB-206ENST00000553938 MYH9P35579 1960 aaKnown RBP12.83□□□□□ -0.36
SPTB-206ENST00000553938 A6NHS1 94 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 ASAP2O43150 1006 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 PDE6CP51160 858 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 RPS6P62753 249 aaKnown RBP12.83□□□□□ -0.36
SPTB-206ENST00000553938 MTMR1Q13613 665 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 NAP1L3Q99457 506 aaPredicted RBP12.83□□□□□ -0.36
SPTB-206ENST00000553938 APOBEC3GQ9HC16 384 aaKnown RBP12.83□□□□□ -0.36
SPTB-206ENST00000553938 AGO4Q9HCK5 861 aaKnown RBP12.83□□□□□ -0.36
SPTB-206ENST00000553938 RHBDL2Q9NX52 303 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 RAB20Q9NX57 234 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 TBX20Q9UMR3 447 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 USP15Q9Y4E8 981 aaPredicted RBP12.83□□□□□ -0.36
SPTB-206ENST00000553938 ZNF541Q9H0D2 1346 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 ZNF646O15015 1829 aaPredicted RBP12.83□□□□□ -0.36
SPTB-206ENST00000553938 CBX6O95503 412 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 TTC4O95801 387 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 NQO1P15559 274 aaKnown RBP12.83□□□□□ -0.36
SPTB-206ENST00000553938 HIRAP54198 1017 aaPredicted RBP12.83□□□□□ -0.36
SPTB-206ENST00000553938 DRG2P55039 364 aaKnown RBP12.83□□□□□ -0.36
SPTB-206ENST00000553938 NLRP11P59045 1033 aaKnown RBP12.83□□□□□ -0.36
SPTB-206ENST00000553938 PKN2Q16513 984 aaKnown RBP12.83□□□□□ -0.36
SPTB-206ENST00000553938 ZNF449Q6P9G9 518 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 SLC9A9Q8IVB4 645 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 CENPTQ96BT3 561 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 WNT8AQ9H1J5 351 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 DNPEPQ9ULA0 475 aa12.83□□□□□ -0.36
SPTB-206ENST00000553938 MIF4GDA9UHW6 222 aaKnown RBP12.82□□□□□ -0.36
SPTB-206ENST00000553938 CAP2P40123 477 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms