RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 ZMYND10O75800 440 aa22.03■■□□□ 1.12
FOXA1-203ENST00000553751 RHOBTB3O94955 611 aa22.03■■□□□ 1.12
FOXA1-203ENST00000553751 ANP32AP39687 249 aaKnown RBP22.03■■□□□ 1.12
FOXA1-203ENST00000553751 TFAMQ00059 246 aaKnown RBP22.03■■□□□ 1.12
FOXA1-203ENST00000553751 ROR1Q01973 937 aa22.03■■□□□ 1.12
FOXA1-203ENST00000553751 FAM160A1Q05DH4 1040 aa22.03■■□□□ 1.12
FOXA1-203ENST00000553751 ZNF280DQ6N043 979 aa22.03■■□□□ 1.12
FOXA1-203ENST00000553751 KIAA1586Q9HCI6 787 aa22.03■■□□□ 1.12
FOXA1-203ENST00000553751 CGNQ9P2M7 1197 aaKnown RBP22.03■■□□□ 1.12
FOXA1-203ENST00000553751 TIMM13Q9Y5L4 95 aaPredicted RBP22.03■■□□□ 1.12
FOXA1-203ENST00000553751 PTPRJQ12913 1337 aa22.03■■□□□ 1.12
FOXA1-203ENST00000553751 ZNF233A6NK53 670 aa22.02■■□□□ 1.12
FOXA1-203ENST00000553751 PAX3P23760 479 aa22.02■■□□□ 1.12
FOXA1-203ENST00000553751 CYP2J2P51589 502 aa22.02■■□□□ 1.12
FOXA1-203ENST00000553751 SNRNP35Q16560 246 aaKnown RBP22.02■■□□□ 1.12
FOXA1-203ENST00000553751 CTXN3Q4LDR2 81 aa22.02■■□□□ 1.12
FOXA1-203ENST00000553751 DSTYKQ6XUX3 929 aa22.02■■□□□ 1.12
FOXA1-203ENST00000553751 C1orf127Q8N9H9 656 aa22.02■■□□□ 1.12
FOXA1-203ENST00000553751 XXYLT1Q8NBI6 393 aa22.02■■□□□ 1.12
FOXA1-203ENST00000553751 CXorf38Q8TB03 319 aa22.02■■□□□ 1.12
FOXA1-203ENST00000553751 WDR27A2RRH5 827 aa22.01■■□□□ 1.11
FOXA1-203ENST00000553751 OAZ2O95190 189 aa22.01■■□□□ 1.11
FOXA1-203ENST00000553751 C8AP07357 584 aa22.01■■□□□ 1.11
FOXA1-203ENST00000553751 TYMPP19971 482 aa22.01■■□□□ 1.11
FOXA1-203ENST00000553751 SP100P23497 879 aaPredicted RBP22.01■■□□□ 1.11
FOXA1-203ENST00000553751 TAF6P49848 677 aa22.01■■□□□ 1.11
FOXA1-203ENST00000553751 YWHAHQ04917 246 aaPredicted RBP22.01■■□□□ 1.11
FOXA1-203ENST00000553751 KCNB1Q14721 858 aa22.01■■□□□ 1.11
FOXA1-203ENST00000553751 LIN9Q5TKA1 542 aa22.01■■□□□ 1.11
FOXA1-203ENST00000553751 LMBRD2Q68DH5 695 aaPredicted RBP22.01■■□□□ 1.11
FOXA1-203ENST00000553751 CYP26C1Q6V0L0 522 aa22.01■■□□□ 1.11
FOXA1-203ENST00000553751 GOLGA5Q8TBA6 731 aa22.01■■□□□ 1.11
FOXA1-203ENST00000553751 SMG7Q92540 1137 aaKnown RBP22.01■■□□□ 1.11
FOXA1-203ENST00000553751 SENP8Q96LD8 212 aa22.01■■□□□ 1.11
FOXA1-203ENST00000553751 PRKD2Q9BZL6 878 aa22.01■■□□□ 1.11
FOXA1-203ENST00000553751 MTMR12Q9C0I1 747 aa22.01■■□□□ 1.11
FOXA1-203ENST00000553751 KCTD10Q9H3F6 313 aa22.01■■□□□ 1.11
FOXA1-203ENST00000553751 TULP1O00294 542 aaPredicted RBP22■■□□□ 1.11
FOXA1-203ENST00000553751 ABLIM3O94929 683 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 ITGB3P05106 788 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 ODC1P11926 461 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 POLR2BP30876 1174 aaKnown RBP22■■□□□ 1.11
FOXA1-203ENST00000553751 PNOCQ13519 176 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 SCARA3Q6AZY7 606 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 RNF135Q8IUD6 432 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 ZNF461Q8TAF7 563 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 SLC7A14Q8TBB6 771 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 CACTINQ8WUQ7 758 aaKnown RBP22■■□□□ 1.11
FOXA1-203ENST00000553751 CCDC47Q96A33 483 aaKnown RBP22■■□□□ 1.11
FOXA1-203ENST00000553751 CCDC34Q96HJ3 373 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 TSHZ2Q9NRE2 1034 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 INTS13Q9NVM9 706 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 CHMP5Q9NZZ3 219 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 ITGA11Q9UKX5 1188 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 NR2E1Q9Y466 385 aa22■■□□□ 1.11
FOXA1-203ENST00000553751 C2CD4DB7Z1M9 353 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 PI4K2BG5E9Z4 385 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 HNRNPA1P09651 372 aaKnown RBP eCLIP21.99■■□□□ 1.11
FOXA1-203ENST00000553751 TMEM191BP0C7N4 346 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 HOXA9P31269 272 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 ARPP19P56211 112 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 CYP24A1Q07973 514 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 SURF1Q15526 300 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 PPM1LQ5SGD2 360 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 OVOS1Q6IE37 1185 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 CCDC149Q6ZUS6 474 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 RDH13Q8NBN7 331 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 OR5B17Q8NGF7 314 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 TMEM174Q8WUU8 243 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 BORCS6Q96GS4 357 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 ZNF560Q96MR9 790 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 EPHX3Q9H6B9 360 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 WDR6Q9NNW5 1121 aaKnown RBP21.99■■□□□ 1.11
FOXA1-203ENST00000553751 SIX4Q9UIU6 781 aa21.99■■□□□ 1.11
FOXA1-203ENST00000553751 PDXKO00764 312 aa21.98■■□□□ 1.11
FOXA1-203ENST00000553751 CYP11A1P05108 521 aa21.98■■□□□ 1.11
FOXA1-203ENST00000553751 PNPLA4P41247 253 aa21.98■■□□□ 1.11
FOXA1-203ENST00000553751 PSMD6Q15008 389 aa21.98■■□□□ 1.11
FOXA1-203ENST00000553751 UVSSAQ2YD98 709 aa21.98■■□□□ 1.11
FOXA1-203ENST00000553751 SV2CQ496J9 727 aa21.98■■□□□ 1.11
FOXA1-203ENST00000553751 USP37Q86T82 979 aa21.98■■□□□ 1.11
FOXA1-203ENST00000553751 WDR49Q8IV35 697 aa21.98■■□□□ 1.11
FOXA1-203ENST00000553751 ANKRD36BP1Q96IX9 119 aa21.98■■□□□ 1.11
FOXA1-203ENST00000553751 OXCT2Q9BYC2 517 aaPredicted RBP21.98■■□□□ 1.11
FOXA1-203ENST00000553751 GZF1Q9H116 711 aaPredicted RBP21.98■■□□□ 1.11
FOXA1-203ENST00000553751 MUTYHQ9UIF7 546 aa21.98■■□□□ 1.11
FOXA1-203ENST00000553751 AGAP1Q9UPQ3 857 aa21.98■■□□□ 1.11
FOXA1-203ENST00000553751 USTQ9Y2C2 406 aa21.98■■□□□ 1.11
FOXA1-203ENST00000553751 CLUHO75153 1309 aa21.98■■□□□ 1.11
FOXA1-203ENST00000553751 ARHGEF37A1IGU5 675 aa21.97■■□□□ 1.11
FOXA1-203ENST00000553751 KPNA7A9QM74 516 aa21.97■■□□□ 1.11
FOXA1-203ENST00000553751 EXOC3O60645 756 aa21.97■■□□□ 1.11
FOXA1-203ENST00000553751 GADD45BO75293 160 aaPredicted RBP21.97■■□□□ 1.11
FOXA1-203ENST00000553751 POU2F2P09086 479 aa21.97■■□□□ 1.11
FOXA1-203ENST00000553751 ATF2P15336 505 aa21.97■■□□□ 1.11
FOXA1-203ENST00000553751 TPGS2Q68CL5 300 aa21.97■■□□□ 1.11
FOXA1-203ENST00000553751 RTL10Q7L3V2 364 aa21.97■■□□□ 1.11
FOXA1-203ENST00000553751 SLC9A9Q8IVB4 645 aa21.97■■□□□ 1.11
FOXA1-203ENST00000553751 CSGALNACT2Q8N6G5 542 aa21.97■■□□□ 1.11
FOXA1-203ENST00000553751 LRRC52Q8N7C0 313 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms