RNA–Protein interactions for RNA: ENST00000553597.5

SNRPN-206, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-206ENST00000553597 CEP63Q96MT8 703 aa8.65□□□□□ -1.02
SNRPN-206ENST00000553597 SAMSN1Q9NSI8 373 aaKnown RBP8.65□□□□□ -1.02
SNRPN-206ENST00000553597 ARMCX3Q9UH62 379 aaPredicted RBP8.65□□□□□ -1.02
SNRPN-206ENST00000553597 ITGA11Q9UKX5 1188 aa8.65□□□□□ -1.02
SNRPN-206ENST00000553597 POLIQ9UNA4 740 aa8.65□□□□□ -1.02
SNRPN-206ENST00000553597 NFE2L3Q9Y4A8 694 aa8.65□□□□□ -1.02
SNRPN-206ENST00000553597 MYO16Q9Y6X6 1858 aa8.65□□□□□ -1.02
SNRPN-206ENST00000553597 CHD9Q3L8U1 2897 aa8.65□□□□□ -1.03
SNRPN-206ENST00000553597 PTPRDP23468 1912 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 ANO9A1A5B4 782 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 CYB561D2O14569 222 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 HCRTO43612 131 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 LRRN2O75325 713 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 VNN1O95497 513 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 CXCL14O95715 111 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 HLA-DRAP01903 254 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 SOD2P04179 222 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 PRKCSHP14314 528 aaPredicted RBP8.64□□□□□ -1.03
SNRPN-206ENST00000553597 CYP3A5P20815 502 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 LRPAP1P30533 357 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 RPL9P32969 192 aaKnown RBP8.64□□□□□ -1.03
SNRPN-206ENST00000553597 RAP1GAPP47736 663 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 NRIP1P48552 1158 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 MXI1P50539 228 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 RBM10P98175 930 aaKnown RBP8.64□□□□□ -1.03
SNRPN-206ENST00000553597 PLCB3Q01970 1234 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 LRMPQ12912 555 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 MYBPC2Q14324 1141 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 SMC1AQ14683 1233 aaKnown RBP8.64□□□□□ -1.03
SNRPN-206ENST00000553597 PTPN14Q15678 1187 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 PSMD5Q16401 504 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 ZNF699Q32M78 642 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 CBWD6Q4V339 395 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 CBWD3Q5JTY5 395 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 CBWD5Q5RIA9 395 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 FILIP1Q7Z7B0 1213 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 NT5DC4Q86YG4 428 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 TAS1R2Q8TE23 839 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 MRPL38Q96DV4 380 aaKnown RBP8.64□□□□□ -1.03
SNRPN-206ENST00000553597 HPDLQ96IR7 371 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 SENP8Q96LD8 212 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 MMS19Q96T76 1030 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 MKNK1Q9BUB5 465 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 TAB2Q9NYJ8 693 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 MAGEC2Q9UBF1 373 aaPredicted RBP8.64□□□□□ -1.03
SNRPN-206ENST00000553597 NXF1Q9UBU9 619 aaKnown RBP8.64□□□□□ -1.03
SNRPN-206ENST00000553597 SNX9Q9Y5X1 595 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 MTCH2Q9Y6C9 303 aa8.64□□□□□ -1.03
SNRPN-206ENST00000553597 KPNA7A9QM74 516 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 KCNJ18B7U540 433 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 TMEM189-UBE2V1I3L0A0 370 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 PIRO00625 290 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 MAPK13O15264 365 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 LINC01565O15544 149 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 TRAPPC3O43617 180 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 LETM1O95202 739 aaPredicted RBP8.63□□□□□ -1.03
SNRPN-206ENST00000553597 FGFR1OPO95684 399 aaKnown RBP8.63□□□□□ -1.03
SNRPN-206ENST00000553597 CST3P01034 146 aaPredicted RBP8.63□□□□□ -1.03
SNRPN-206ENST00000553597 C4BPAP04003 597 aaKnown RBP8.63□□□□□ -1.03
SNRPN-206ENST00000553597 OR4Q2P0C623 313 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 SPATA31D3P0C874 917 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 CTSAP10619 480 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 ODC1P11926 461 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 ERCC5P28715 1186 aaPredicted RBP8.63□□□□□ -1.03
SNRPN-206ENST00000553597 LILRA4P59901 499 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 TNNC1P63316 161 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 RBP5P82980 135 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 MYL5Q02045 173 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 UBE3AQ05086 875 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 MYO1EQ12965 1108 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 NCOA4Q13772 614 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 KCNJ12Q14500 433 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 USP41Q3LFD5 358 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 VARS2Q5ST30 1063 aaKnown RBP8.63□□□□□ -1.03
SNRPN-206ENST00000553597 WSCD1Q658N2 575 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.63□□□□□ -1.03
SNRPN-206ENST00000553597 SPATA31D4Q6ZUB0 917 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 SV2AQ7L0J3 742 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 USP37Q86T82 979 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 PALB2Q86YC2 1186 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 MAFAQ8NHW3 353 aaPredicted RBP8.63□□□□□ -1.03
SNRPN-206ENST00000553597 BORCS6Q96GS4 357 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 SUSD3Q96L08 255 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 DCBLD2Q96PD2 775 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 TTPALQ9BTX7 342 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 FUCA2Q9BTY2 467 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 APOL5Q9BWW9 433 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 LMAN2LQ9H0V9 348 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 NSUN3Q9H649 340 aaKnown RBP8.63□□□□□ -1.03
SNRPN-206ENST00000553597 TLE6Q9H808 572 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 TMEM8AQ9HCN3 771 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 MRPL17Q9NRX2 175 aaKnown RBP8.63□□□□□ -1.03
SNRPN-206ENST00000553597 FANCLQ9NW38 375 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 PCDHB8Q9UN66 801 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 LZTS1Q9Y250 596 aa8.63□□□□□ -1.03
SNRPN-206ENST00000553597 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.63□□□□□ -1.03
SNRPN-206ENST00000553597 SZT2Q5T011 3432 aa8.62□□□□□ -1.03
SNRPN-206ENST00000553597 C2orf71A6NGG8 1288 aa8.62□□□□□ -1.03
SNRPN-206ENST00000553597 FSCN2O14926 492 aa8.62□□□□□ -1.03
SNRPN-206ENST00000553597 ADAM12O43184 909 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms