RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 CLIC2O15247 247 aa25.53■■□□□ 1.68
TDP1-205ENST00000553527 CCL16O15467 120 aa25.53■■□□□ 1.68
TDP1-205ENST00000553527 LILRA4P59901 499 aa25.53■■□□□ 1.68
TDP1-205ENST00000553527 POU5F1Q01860 360 aaKnown RBP25.53■■□□□ 1.68
TDP1-205ENST00000553527 ROR1Q01973 937 aa25.53■■□□□ 1.68
TDP1-205ENST00000553527 EHHADHQ08426 723 aa25.53■■□□□ 1.68
TDP1-205ENST00000553527 MRPL58Q14197 206 aaKnown RBP25.53■■□□□ 1.68
TDP1-205ENST00000553527 TMEM31Q5JXX7 168 aa25.53■■□□□ 1.68
TDP1-205ENST00000553527 USP37Q86T82 979 aa25.53■■□□□ 1.68
TDP1-205ENST00000553527 BRSK2Q8IWQ3 736 aa25.53■■□□□ 1.68
TDP1-205ENST00000553527 RDH13Q8NBN7 331 aa25.53■■□□□ 1.68
TDP1-205ENST00000553527 ENGASEQ8NFI3 743 aa25.53■■□□□ 1.68
TDP1-205ENST00000553527 SCFD1Q8WVM8 642 aa25.53■■□□□ 1.68
TDP1-205ENST00000553527 LMBRD1Q9NUN5 540 aa25.53■■□□□ 1.68
TDP1-205ENST00000553527 LIMD1Q9UGP4 676 aa25.53■■□□□ 1.68
TDP1-205ENST00000553527 M0QZQ0 153 aa25.52■■□□□ 1.68
TDP1-205ENST00000553527 PIRO00625 290 aa25.52■■□□□ 1.68
TDP1-205ENST00000553527 SPTLC1O15269 473 aa25.52■■□□□ 1.68
TDP1-205ENST00000553527 ELF1P32519 619 aa25.52■■□□□ 1.68
TDP1-205ENST00000553527 YWHAHQ04917 246 aaPredicted RBP25.52■■□□□ 1.68
TDP1-205ENST00000553527 SNW1Q13573 536 aaKnown RBP25.52■■□□□ 1.68
TDP1-205ENST00000553527 KMT5BQ4FZB7 885 aa25.52■■□□□ 1.68
TDP1-205ENST00000553527 SLC8B1Q6J4K2 584 aa25.52■■□□□ 1.68
TDP1-205ENST00000553527 ZNF280DQ6N043 979 aa25.52■■□□□ 1.68
TDP1-205ENST00000553527 ZNF461Q8TAF7 563 aa25.52■■□□□ 1.68
TDP1-205ENST00000553527 ACSF2Q96CM8 615 aaPredicted RBP25.52■■□□□ 1.68
TDP1-205ENST00000553527 FAM84AQ96KN4 292 aa25.52■■□□□ 1.68
TDP1-205ENST00000553527 SENP8Q96LD8 212 aa25.52■■□□□ 1.68
TDP1-205ENST00000553527 PDE11AQ9HCR9 933 aa25.52■■□□□ 1.68
TDP1-205ENST00000553527 WDR6Q9NNW5 1121 aaKnown RBP25.52■■□□□ 1.68
TDP1-205ENST00000553527 EXOC1Q9NV70 894 aa25.52■■□□□ 1.68
TDP1-205ENST00000553527 HSPBP1Q9NZL4 362 aa25.52■■□□□ 1.68
TDP1-205ENST00000553527 ANO9A1A5B4 782 aa25.51■■□□□ 1.67
TDP1-205ENST00000553527 WDR27A2RRH5 827 aa25.51■■□□□ 1.67
TDP1-205ENST00000553527 TGFB1I1O43294 461 aa25.51■■□□□ 1.67
TDP1-205ENST00000553527 KLRC4O43908 158 aa25.51■■□□□ 1.67
TDP1-205ENST00000553527 TBC1D4O60343 1298 aa25.51■■□□□ 1.67
TDP1-205ENST00000553527 KINO60870 393 aaKnown RBP25.51■■□□□ 1.67
TDP1-205ENST00000553527 GBP2P32456 591 aaPredicted RBP25.51■■□□□ 1.67
TDP1-205ENST00000553527 CYP26C1Q6V0L0 522 aa25.51■■□□□ 1.67
TDP1-205ENST00000553527 OTOP3Q7RTS5 596 aa25.51■■□□□ 1.67
TDP1-205ENST00000553527 GRASPQ7Z6J2 395 aaPredicted RBP25.51■■□□□ 1.67
TDP1-205ENST00000553527 LRFN3Q9BTN0 628 aa25.51■■□□□ 1.67
TDP1-205ENST00000553527 C11orf16Q9NQ32 467 aa25.51■■□□□ 1.67
TDP1-205ENST00000553527 ZNF233A6NK53 670 aa25.5■■□□□ 1.67
TDP1-205ENST00000553527 PRRG1O14668 218 aa25.5■■□□□ 1.67
TDP1-205ENST00000553527 CLUHO75153 1309 aa25.5■■□□□ 1.67
TDP1-205ENST00000553527 PRR29P0C7W0 189 aa25.5■■□□□ 1.67
TDP1-205ENST00000553527 CPB1P15086 417 aa25.5■■□□□ 1.67
TDP1-205ENST00000553527 CYP2J2P51589 502 aa25.5■■□□□ 1.67
TDP1-205ENST00000553527 NTHL1P78549 312 aa25.5■■□□□ 1.67
TDP1-205ENST00000553527 CBWD2Q8IUF1 395 aa25.5■■□□□ 1.67
TDP1-205ENST00000553527 PLCD3Q8N3E9 789 aa25.5■■□□□ 1.67
TDP1-205ENST00000553527 CACTINQ8WUQ7 758 aaKnown RBP25.5■■□□□ 1.67
TDP1-205ENST00000553527 CYP4F11Q9HBI6 524 aa25.5■■□□□ 1.67
TDP1-205ENST00000553527 AGPAT3Q9NRZ7 376 aa25.5■■□□□ 1.67
TDP1-205ENST00000553527 USTQ9Y2C2 406 aa25.5■■□□□ 1.67
TDP1-205ENST00000553527 KIAA0391O15091 583 aaKnown RBP25.49■■□□□ 1.67
TDP1-205ENST00000553527 ASGR2P07307 311 aa25.49■■□□□ 1.67
TDP1-205ENST00000553527 OR4Q2P0C623 313 aa25.49■■□□□ 1.67
TDP1-205ENST00000553527 AARSP49588 968 aaKnown RBP eCLIP25.49■■□□□ 1.67
TDP1-205ENST00000553527 STK4Q13043 487 aa25.49■■□□□ 1.67
TDP1-205ENST00000553527 UVSSAQ2YD98 709 aa25.49■■□□□ 1.67
TDP1-205ENST00000553527 LMBRD2Q68DH5 695 aaPredicted RBP25.49■■□□□ 1.67
TDP1-205ENST00000553527 OVOS1Q6IE37 1185 aa25.49■■□□□ 1.67
TDP1-205ENST00000553527 GET4Q7L5D6 327 aaPredicted RBP25.49■■□□□ 1.67
TDP1-205ENST00000553527 NT5DC4Q86YG4 428 aa25.49■■□□□ 1.67
TDP1-205ENST00000553527 TIGD1Q96MW7 591 aa25.49■■□□□ 1.67
TDP1-205ENST00000553527 AGAP1Q9UPQ3 857 aa25.49■■□□□ 1.67
TDP1-205ENST00000553527 UBE4BO95155 1302 aa25.48■■□□□ 1.67
TDP1-205ENST00000553527 GPR37L1O60883 481 aa25.48■■□□□ 1.67
TDP1-205ENST00000553527 ABLIM3O94929 683 aa25.48■■□□□ 1.67
TDP1-205ENST00000553527 RPN1P04843 607 aaKnown RBP25.48■■□□□ 1.67
TDP1-205ENST00000553527 ITGB3P05106 788 aa25.48■■□□□ 1.67
TDP1-205ENST00000553527 MYL1P05976 194 aa25.48■■□□□ 1.67
TDP1-205ENST00000553527 KRT19P08727 400 aa25.48■■□□□ 1.67
TDP1-205ENST00000553527 HNRNPA1P09651 372 aaKnown RBP eCLIP25.48■■□□□ 1.67
TDP1-205ENST00000553527 ODC1P11926 461 aa25.48■■□□□ 1.67
TDP1-205ENST00000553527 POLR2BP30876 1174 aaKnown RBP25.48■■□□□ 1.67
TDP1-205ENST00000553527 TAF6P49848 677 aa25.48■■□□□ 1.67
TDP1-205ENST00000553527 KNOP1Q1ED39 458 aaKnown RBP25.48■■□□□ 1.67
TDP1-205ENST00000553527 HS2ST1Q7LGA3 356 aa25.48■■□□□ 1.67
TDP1-205ENST00000553527 ZDHHC14Q8IZN3 488 aa25.48■■□□□ 1.67
TDP1-205ENST00000553527 CSGALNACT2Q8N6G5 542 aa25.48■■□□□ 1.67
TDP1-205ENST00000553527 EDAQ92838 391 aa25.48■■□□□ 1.67
TDP1-205ENST00000553527 CYB561D2O14569 222 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 N4BP1O75113 896 aaKnown RBP25.47■■□□□ 1.67
TDP1-205ENST00000553527 XYLBO75191 536 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 OAZ2O95190 189 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 SEC24AO95486 1093 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 ATF2P15336 505 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 ZXDAP98168 799 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 ADCY1Q08828 1119 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 PTPN21Q16825 1174 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 SCARA3Q6AZY7 606 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 RNF19BQ6ZMZ0 732 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 KIAA0895Q8NCT3 520 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 PGLYRP2Q96PD5 576 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 RHOBTB2Q9BYZ6 727 aa25.47■■□□□ 1.67
TDP1-205ENST00000553527 HCFC1R1Q9NWW0 138 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms