RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 KPNA6O60684 536 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 LRRN2O75325 713 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 ZRANB2O95218 330 aaKnown RBP eCLIP7.83□□□□□ -1.16
ATXN3-221ENST00000553498 HLA-DRAP01903 254 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 RPLP2P05387 115 aaKnown RBP7.83□□□□□ -1.16
ATXN3-221ENST00000553498 CLTAP09496 248 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 SRGAP2CP0DJJ0 459 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 MARK3P27448 753 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 CTSOP43234 321 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-221ENST00000553498 CPT1AP50416 773 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 TNNC1P63316 161 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 FAM193AP78312 1265 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 MBTD1Q05BQ5 628 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 GPS2Q13227 327 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 BIRC3Q13489 604 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 CUL2Q13617 745 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 NAA30Q147X3 362 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-221ENST00000553498 ENOX2Q16206 610 aaKnown RBP7.83□□□□□ -1.16
ATXN3-221ENST00000553498 ATF7IP2Q5U623 682 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 PEX26Q7Z412 305 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 RHPN2Q8IUC4 686 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 RPUSD2Q8IZ73 545 aaKnown RBP7.83□□□□□ -1.16
ATXN3-221ENST00000553498 LRRN4CLQ8ND94 238 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 SPATA4Q8NEY3 305 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 AFG1LQ8WV93 481 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 HES6Q96HZ4 224 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 HHIPL1Q96JK4 782 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 KREMEN1Q96MU8 473 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 MMS19Q96T76 1030 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 PTPN18Q99952 460 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 C16orf70Q9BSU1 422 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 PACSIN1Q9BY11 444 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 INO80BQ9C086 356 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-221ENST00000553498 CARD9Q9H257 536 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 ACBD3Q9H3P7 528 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 R3HDMLQ9H3Y0 253 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 TUT1Q9H6E5 874 aaKnown RBP7.83□□□□□ -1.16
ATXN3-221ENST00000553498 ANKZF1Q9H8Y5 726 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 ZFYVE28Q9HCC9 887 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 ABCB6Q9NP58 842 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 AVENQ9NQS1 362 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-221ENST00000553498 PDGFCQ9NRA1 345 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 ANKFY1Q9P2R3 1169 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 HDAC6Q9UBN7 1215 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 AMFRQ9UKV5 643 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 TFR2Q9UP52 801 aa7.83□□□□□ -1.16
ATXN3-221ENST00000553498 CCDC188H7C350 402 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 INO80B-WBP1J3KQ70 363 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 ABLIM1O14639 778 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 CYP26A1O43174 497 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 PHACTR2O75167 634 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 WFS1O76024 890 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 KIF4AO95239 1232 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 LSM8O95777 96 aaKnown RBP7.82□□□□□ -1.16
ATXN3-221ENST00000553498 F2P00734 622 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 ASS1P00966 412 aaKnown RBP7.82□□□□□ -1.16
ATXN3-221ENST00000553498 TNNC2P02585 160 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 FTLP02792 175 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-221ENST00000553498 CYP1A2P05177 515 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 MMP3P08254 477 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 ZSCAN20P17040 1043 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-221ENST00000553498 HSPA6P17066 643 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 TNFRSF8P28908 595 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 ATICP31939 592 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 USP8P40818 1118 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 RGS2P41220 211 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 ADCYAP1R1P41586 468 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 ACOT2P49753 483 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 ZNF157P51786 506 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-221ENST00000553498 PPFIA1Q13136 1202 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 NCOA4Q13772 614 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 TDRD10Q5VZ19 366 aaKnown RBP7.82□□□□□ -1.16
ATXN3-221ENST00000553498 CST9Q5W186 159 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 ACAD10Q6JQN1 1059 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 RGMBQ6NW40 437 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 CC2D1AQ6P1N0 951 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-221ENST00000553498 MTHFD1LQ6UB35 978 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 C17orf99Q6UX52 265 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 DAAM2Q86T65 1068 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 TRIM50Q86XT4 487 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 RASAL3Q86YV0 1011 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 NPAS3Q8IXF0 933 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 RASGEF1CQ8N431 466 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 LRRC71Q8N4P6 559 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 METTL13Q8N6R0 699 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 UBL4BQ8N7F7 174 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 ZSWIM2Q8NEG5 633 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 OR6J1Q8NGC5 347 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 OLIG1Q8TAK6 271 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 SLC35G2Q8TBE7 412 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 USP6NLQ92738 828 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 COPS5Q92905 334 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 ANKRD36BP1Q96IX9 119 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 INSM2Q96T92 566 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-221ENST00000553498 POP1Q99575 1024 aaKnown RBP7.82□□□□□ -1.16
ATXN3-221ENST00000553498 KATNAL1Q9BW62 490 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 PLVAPQ9BX97 442 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 ZNF518BQ9C0D4 1074 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 HAPLN2Q9GZV7 340 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 RNPEPQ9H4A4 650 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms