RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 DHX58Q96C10 678 aa14.04□□□□□ -0.16
ACTN1-207ENST00000553290 TRIM9Q9C026 710 aa14.04□□□□□ -0.16
ACTN1-207ENST00000553290 IKZF4Q9H2S9 585 aa14.04□□□□□ -0.16
ACTN1-207ENST00000553290 TMEM206Q9H813 350 aa14.04□□□□□ -0.16
ACTN1-207ENST00000553290 MAGEF1Q9HAY2 307 aa14.04□□□□□ -0.16
ACTN1-207ENST00000553290 CYP4F11Q9HBI6 524 aa14.04□□□□□ -0.16
ACTN1-207ENST00000553290 AVENQ9NQS1 362 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-207ENST00000553290 DNMT3BQ9UBC3 853 aaKnown RBP14.04□□□□□ -0.16
ACTN1-207ENST00000553290 AFF4Q9UHB7 1163 aaKnown RBP14.04□□□□□ -0.16
ACTN1-207ENST00000553290 CDH7Q9ULB5 785 aa14.04□□□□□ -0.16
ACTN1-207ENST00000553290 KCNH3Q9ULD8 1083 aa14.04□□□□□ -0.16
ACTN1-207ENST00000553290 MUC6Q6W4X9 2439 aa14.04□□□□□ -0.16
ACTN1-207ENST00000553290 ANO9A1A5B4 782 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 OR6C75A6NL08 312 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 ANHXE9PGG2 379 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 PIRO00625 290 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 PPEF2O14830 753 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 PDGFBP01127 241 aaPredicted RBP14.03□□□□□ -0.16
ACTN1-207ENST00000553290 ODC1P11926 461 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 PTPN2P17706 415 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 AVPR2P30518 371 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 NUBP1P53384 320 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 HTR4Q13639 388 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 PKP1Q13835 747 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 OVOS1Q6IE37 1185 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 CNNM4Q6P4Q7 775 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 ELMOD1Q8N336 334 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 RSAD2Q8WXG1 361 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 FGF13Q92913 245 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 SENP8Q96LD8 212 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 FAM213AQ9BRX8 229 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 MFSD1Q9H3U5 465 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 HCFC1R1Q9NWW0 138 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 DPP3Q9NY33 737 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 FAM13BQ9NYF5 915 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 FBXL21Q9UKT6 434 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 PCDHA7Q9UN72 937 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 TIMM13Q9Y5L4 95 aaPredicted RBP14.03□□□□□ -0.16
ACTN1-207ENST00000553290 INSL5Q9Y5Q6 135 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 KMT2EQ8IZD2 1858 aa14.03□□□□□ -0.16
ACTN1-207ENST00000553290 NOTCH4Q99466 2003 aa14.02□□□□□ -0.16
ACTN1-207ENST00000553290 KIAA0391O15091 583 aaKnown RBP14.02□□□□□ -0.17
ACTN1-207ENST00000553290 POLR2DO15514 142 aaKnown RBP14.02□□□□□ -0.17
ACTN1-207ENST00000553290 PRPF6O94906 941 aaKnown RBP14.02□□□□□ -0.17
ACTN1-207ENST00000553290 SEC24AO95486 1093 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 RHOP08100 348 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 SRFP11831 508 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 VCPP55072 806 aaKnown RBP14.02□□□□□ -0.17
ACTN1-207ENST00000553290 ASIC1P78348 528 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 DNM1Q05193 864 aaKnown RBP14.02□□□□□ -0.17
ACTN1-207ENST00000553290 ADCY1Q08828 1119 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 MYBPC2Q14324 1141 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 IER5LQ5T953 404 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 MTSS1LQ765P7 747 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 ITFG1Q8TB96 612 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 C7orf25Q9BPX7 421 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 PYM1Q9BRP8 204 aaKnown RBP14.02□□□□□ -0.17
ACTN1-207ENST00000553290 FGFBP2Q9BYJ0 223 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 WNT16Q9UBV4 365 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 RCOR1Q9UKL0 485 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 DSEQ9UL01 958 aa14.02□□□□□ -0.17
ACTN1-207ENST00000553290 MRPS23Q9Y3D9 190 aaKnown RBP14.02□□□□□ -0.17
ACTN1-207ENST00000553290 SPTLC1O15269 473 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 EIF3DO15371 548 aaKnown RBP eCLIP14.01□□□□□ -0.17
ACTN1-207ENST00000553290 NARSO43776 548 aaKnown RBP14.01□□□□□ -0.17
ACTN1-207ENST00000553290 EXTL3O43909 919 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 CYP11A1P05108 521 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 TAF6P49848 677 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 CLCN5P51795 746 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 PTPN5P54829 565 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 GPR17Q13304 367 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 RESP18Q5W5W9 173 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 ASTLQ6HA08 431 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-207ENST00000553290 ARMCX5Q6P1M9 558 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 RNF19BQ6ZMZ0 732 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 BRSK2Q8IWQ3 736 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 EFCAB13Q8IY85 973 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 CACTINQ8WUQ7 758 aaKnown RBP14.01□□□□□ -0.17
ACTN1-207ENST00000553290 SAAL1Q96ER3 474 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 ZNF512Q96ME7 567 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-207ENST00000553290 GDE1Q9NZC3 331 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 NUMBLQ9Y6R0 609 aa14.01□□□□□ -0.17
ACTN1-207ENST00000553290 SCN1AP35498 2009 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 ZNF197O14709 1029 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 MICAL2O94851 1124 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 PNPLA4P41247 253 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 NHLH1Q02575 133 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 PLD1Q13393 1074 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 FAM26FQ5R3K3 315 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 IQCEQ6IPM2 695 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 UNC13DQ70J99 1090 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 METTL23Q86XA0 190 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 NPAS3Q8IXF0 933 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 SIX5Q8N196 739 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 GPD1LQ8N335 351 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 LEMD2Q8NC56 503 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 ZSWIM2Q8NEG5 633 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 PRSS33Q8NF86 280 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 FGF14Q92915 247 aa14□□□□□ -0.17
ACTN1-207ENST00000553290 ZNF560Q96MR9 790 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms