RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 L1TD1Q5T7N2 865 aaKnown RBP17.23■□□□□ 0.35
CDK4-215ENST00000553237 C9orf57Q5W0N0 161 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 TPGS2Q68CL5 300 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 CRELD2Q6UXH1 353 aaPredicted RBP17.23■□□□□ 0.35
CDK4-215ENST00000553237 RNF19BQ6ZMZ0 732 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 TCEAL8Q8IYN2 117 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 SYCP3Q8IZU3 236 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 FGF14Q92915 247 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 CORO1BQ9BR76 489 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 AFF4Q9UHB7 1163 aaKnown RBP17.23■□□□□ 0.35
CDK4-215ENST00000553237 EXOC7Q9UPT5 735 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 PCDHB13Q9Y5F0 798 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 INSL5Q9Y5Q6 135 aa17.23■□□□□ 0.35
CDK4-215ENST00000553237 WDFY4Q6ZS81 3184 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 FRMD3A2A2Y4 597 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 KRBA1A5PL33 1030 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 STK25O00506 426 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 SPTLC1O15269 473 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 PI15O43692 258 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 PRPF6O94906 941 aaKnown RBP17.22■□□□□ 0.35
CDK4-215ENST00000553237 OAZ2O95190 189 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 YEATS4O95619 227 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 ZSCAN22P10073 491 aaPredicted RBP17.22■□□□□ 0.35
CDK4-215ENST00000553237 PTPN2P17706 415 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 SLC5A9Q2M3M2 681 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 CWF19L1Q69YN2 538 aaKnown RBP17.22■□□□□ 0.35
CDK4-215ENST00000553237 NPAS3Q8IXF0 933 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 ZSWIM2Q8NEG5 633 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 GPR152Q8TDT2 470 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 DHX58Q96C10 678 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 SAAL1Q96ER3 474 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 MCRS1Q96EZ8 462 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 SENP8Q96LD8 212 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 PGLYRP2Q96PD5 576 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 PHOX2BQ99453 314 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 FAM213AQ9BRX8 229 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 ASB7Q9H672 318 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 OLFML3Q9NRN5 406 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 FAM86C1Q9NVL1 165 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 WNT16Q9UBV4 365 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 KCNH3Q9ULD8 1083 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 DERAQ9Y315 318 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 KMT2EQ8IZD2 1858 aa17.22■□□□□ 0.35
CDK4-215ENST00000553237 H0Y858 1186 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 PIRO00625 290 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 CUTAO60888 179 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 F13A1P00488 732 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 PDIA4P13667 645 aaKnown RBP17.21■□□□□ 0.35
CDK4-215ENST00000553237 CLCN5P51795 746 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 TWF1Q12792 350 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 PKP1Q13835 747 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 E2F4Q16254 413 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 OVOS1Q6IE37 1185 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 SHC4Q6S5L8 630 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 CCDC65Q8IXS2 484 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 EFCAB13Q8IY85 973 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 NOC3LQ8WTT2 800 aaKnown RBP17.21■□□□□ 0.35
CDK4-215ENST00000553237 HPS3Q969F9 1004 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 TCEAL4Q96EI5 215 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 DPP3Q9NY33 737 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 C2CD2Q9Y426 696 aa17.21■□□□□ 0.35
CDK4-215ENST00000553237 NOTCH4Q99466 2003 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 ANO9A1A5B4 782 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 GOLGA8IPA6NC78 632 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 GOLGA8JA6NMD2 632 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 GALR2O43603 387 aaPredicted RBP17.2■□□□□ 0.34
CDK4-215ENST00000553237 ODC1P11926 461 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 CEBPBP17676 345 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 TYMPP19971 482 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 MRE11P49959 708 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 WNT7BP56706 349 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 GPC5P78333 572 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 POTEHQ6S545 545 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 MTSS1LQ765P7 747 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 HS6ST3Q8IZP7 471 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 GLIS3Q8NEA6 775 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 ZNF512Q96ME7 567 aaPredicted RBP17.2■□□□□ 0.34
CDK4-215ENST00000553237 TMEM209Q96SK2 561 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 KXD1Q9BQD3 176 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 TNMDQ9H2S6 317 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 PCIF1Q9H4Z3 704 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 KBTBD4Q9NVX7 518 aa17.2■□□□□ 0.34
CDK4-215ENST00000553237 OR6C75A6NL08 312 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 IL18RAPO95256 599 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 VNN2O95498 520 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 AOC1P19801 751 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 RFX1P22670 979 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 CDR1P51861 262 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 TFAMQ00059 246 aaKnown RBP17.19■□□□□ 0.34
CDK4-215ENST00000553237 DUSP4Q13115 394 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 ALCAMQ13740 583 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 PRSS36Q5K4E3 855 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 IQCEQ6IPM2 695 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 ELMOD1Q8N336 334 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 IQUBQ8NA54 791 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 ATOH1Q92858 354 aaPredicted RBP17.19■□□□□ 0.34
CDK4-215ENST00000553237 CBWD1Q9BRT8 395 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 OXCT2Q9BYC2 517 aaPredicted RBP17.19■□□□□ 0.34
CDK4-215ENST00000553237 TRIM9Q9C026 710 aa17.19■□□□□ 0.34
CDK4-215ENST00000553237 CRISPLD1Q9H336 500 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms