RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 PDE11AQ9HCR9 933 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 EXOC1Q9NV70 894 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 NR2E1Q9Y466 385 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 FAM86C2PA6NEL3 165 aa20.32■□□□□ 0.84
HDAC4-217ENST00000553145 H7C4K7 107 aa20.32■□□□□ 0.84
HDAC4-217ENST00000553145 TULP1O00294 542 aaPredicted RBP20.32■□□□□ 0.84
HDAC4-217ENST00000553145 KIAA0391O15091 583 aaKnown RBP20.32■□□□□ 0.84
HDAC4-217ENST00000553145 CLIC2O15247 247 aa20.32■□□□□ 0.84
HDAC4-217ENST00000553145 ARPP19P56211 112 aa20.32■□□□□ 0.84
HDAC4-217ENST00000553145 ZNF280DQ6N043 979 aa20.32■□□□□ 0.84
HDAC4-217ENST00000553145 CYP26C1Q6V0L0 522 aa20.32■□□□□ 0.84
HDAC4-217ENST00000553145 NT5DC4Q86YG4 428 aa20.32■□□□□ 0.84
HDAC4-217ENST00000553145 SLC7A14Q8TBB6 771 aa20.32■□□□□ 0.84
HDAC4-217ENST00000553145 SENP8Q96LD8 212 aa20.32■□□□□ 0.84
HDAC4-217ENST00000553145 SCN1AP35498 2009 aa20.32■□□□□ 0.84
HDAC4-217ENST00000553145 CLUHO75153 1309 aa20.31■□□□□ 0.84
HDAC4-217ENST00000553145 PTPRJQ12913 1337 aa20.31■□□□□ 0.84
HDAC4-217ENST00000553145 ABLIM3O94929 683 aa20.31■□□□□ 0.84
HDAC4-217ENST00000553145 ZNF202O95125 648 aa20.31■□□□□ 0.84
HDAC4-217ENST00000553145 MYL1P05976 194 aa20.31■□□□□ 0.84
HDAC4-217ENST00000553145 ALADP13716 330 aa20.31■□□□□ 0.84
HDAC4-217ENST00000553145 TFAMQ00059 246 aaKnown RBP20.31■□□□□ 0.84
HDAC4-217ENST00000553145 YWHAHQ04917 246 aaPredicted RBP20.31■□□□□ 0.84
HDAC4-217ENST00000553145 PPM1LQ5SGD2 360 aa20.31■□□□□ 0.84
HDAC4-217ENST00000553145 C1orf127Q8N9H9 656 aa20.31■□□□□ 0.84
HDAC4-217ENST00000553145 TDRD5Q8NAT2 981 aaKnown RBP20.31■□□□□ 0.84
HDAC4-217ENST00000553145 ZNF461Q8TAF7 563 aa20.31■□□□□ 0.84
HDAC4-217ENST00000553145 PIDD1Q9HB75 910 aa20.31■□□□□ 0.84
HDAC4-217ENST00000553145 WDR6Q9NNW5 1121 aaKnown RBP20.31■□□□□ 0.84
HDAC4-217ENST00000553145 USTQ9Y2C2 406 aa20.31■□□□□ 0.84
HDAC4-217ENST00000553145 CCL16O15467 120 aa20.3■□□□□ 0.84
HDAC4-217ENST00000553145 N4BP1O75113 896 aaKnown RBP20.3■□□□□ 0.84
HDAC4-217ENST00000553145 OAZ2O95190 189 aa20.3■□□□□ 0.84
HDAC4-217ENST00000553145 RPN1P04843 607 aaKnown RBP20.3■□□□□ 0.84
HDAC4-217ENST00000553145 HNRNPA1P09651 372 aaKnown RBP eCLIP20.3■□□□□ 0.84
HDAC4-217ENST00000553145 HOXA9P31269 272 aa20.3■□□□□ 0.84
HDAC4-217ENST00000553145 CYP2J2P51589 502 aa20.3■□□□□ 0.84
HDAC4-217ENST00000553145 DPYDQ12882 1025 aa20.3■□□□□ 0.84
HDAC4-217ENST00000553145 KNOP1Q1ED39 458 aaKnown RBP20.3■□□□□ 0.84
HDAC4-217ENST00000553145 LMBRD2Q68DH5 695 aaPredicted RBP20.3■□□□□ 0.84
HDAC4-217ENST00000553145 CXorf38Q8TB03 319 aa20.3■□□□□ 0.84
HDAC4-217ENST00000553145 BORCS6Q96GS4 357 aa20.3■□□□□ 0.84
HDAC4-217ENST00000553145 C1QTNF1Q9BXJ1 281 aa20.3■□□□□ 0.84
HDAC4-217ENST00000553145 ZNF233A6NK53 670 aa20.29■□□□□ 0.84
HDAC4-217ENST00000553145 SEC24AO95486 1093 aa20.29■□□□□ 0.84
HDAC4-217ENST00000553145 ITGB3P05106 788 aa20.29■□□□□ 0.84
HDAC4-217ENST00000553145 OR4Q2P0C623 313 aa20.29■□□□□ 0.84
HDAC4-217ENST00000553145 TYMPP19971 482 aa20.29■□□□□ 0.84
HDAC4-217ENST00000553145 POLR2BP30876 1174 aaKnown RBP20.29■□□□□ 0.84
HDAC4-217ENST00000553145 TAF6P49848 677 aa20.29■□□□□ 0.84
HDAC4-217ENST00000553145 NTHL1P78549 312 aa20.29■□□□□ 0.84
HDAC4-217ENST00000553145 PSMD2Q13200 908 aa20.29■□□□□ 0.84
HDAC4-217ENST00000553145 ZDHHC14Q8IZN3 488 aa20.29■□□□□ 0.84
HDAC4-217ENST00000553145 FMR1NBQ8N0W7 255 aaPredicted RBP20.29■□□□□ 0.84
HDAC4-217ENST00000553145 RDH13Q8NBN7 331 aa20.29■□□□□ 0.84
HDAC4-217ENST00000553145 MTMR12Q9C0I1 747 aa20.29■□□□□ 0.84
HDAC4-217ENST00000553145 CYP11A1P05108 521 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 ODC1P11926 461 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 CPB1P15086 417 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 ATF2P15336 505 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 PAX3P23760 479 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 SNRPFP62306 86 aaKnown RBP20.28■□□□□ 0.84
HDAC4-217ENST00000553145 SNRNP35Q16560 246 aaKnown RBP20.28■□□□□ 0.84
HDAC4-217ENST00000553145 PTPN21Q16825 1174 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 UVSSAQ2YD98 709 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 OVOS1Q6IE37 1185 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 HS2ST1Q7LGA3 356 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 GRASPQ7Z6J2 395 aaPredicted RBP20.28■□□□□ 0.84
HDAC4-217ENST00000553145 USP37Q86T82 979 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 C12orf56Q8IXR9 622 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 OR5B17Q8NGF7 314 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 TMEM209Q96SK2 561 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 KIAA1586Q9HCI6 787 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 SIX4Q9UIU6 781 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 AGAP1Q9UPQ3 857 aa20.28■□□□□ 0.84
HDAC4-217ENST00000553145 RHOBTB3O94955 611 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 VNN2O95498 520 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 ASGR2P07307 311 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 TMEM31Q5JXX7 168 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 TPGS2Q68CL5 300 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 RNF19BQ6ZMZ0 732 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 OTOP3Q7RTS5 596 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 XXYLT1Q8NBI6 393 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 ENGASEQ8NFI3 743 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 CACTINQ8WUQ7 758 aaKnown RBP20.27■□□□□ 0.84
HDAC4-217ENST00000553145 MYADMQ96S97 322 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 RTP3Q9BQQ7 232 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 LRFN3Q9BTN0 628 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 KCTD10Q9H3F6 313 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 CYP4F11Q9HBI6 524 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 INTS13Q9NVM9 706 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 HCFC1R1Q9NWW0 138 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 LIMD1Q9UGP4 676 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 AFF4Q9UHB7 1163 aaKnown RBP20.27■□□□□ 0.84
HDAC4-217ENST00000553145 POLIQ9UNA4 740 aa20.27■□□□□ 0.84
HDAC4-217ENST00000553145 DOCK6Q96HP0 2047 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 ARHGEF37A1IGU5 675 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 KPNA7A9QM74 516 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 CYB561D2O14569 222 aa20.26■□□□□ 0.83
HDAC4-217ENST00000553145 PRRG1O14668 218 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms