RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 B4GALT5O43286 388 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 TGM5O43548 720 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 NPTXRO95502 500 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 ARF4P18085 180 aaPredicted RBP12.36□□□□□ -0.43
TMEM116-218ENST00000552839 CASP5P51878 434 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 DSC1Q08554 894 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 NOLC1Q14978 699 aaKnown RBP eCLIP12.36□□□□□ -0.43
TMEM116-218ENST00000552839 SLFN12LQ6IEE8 588 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 LILRA6Q6PI73 481 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 ZPBP2Q6X784 338 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 GLYCTKQ8IVS8 523 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 KIAA0895Q8NCT3 520 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 MSTO1Q9BUK6 570 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 APOL6Q9BWW8 343 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 FGFBP2Q9BYJ0 223 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 PRKD2Q9BZL6 878 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 GZF1Q9H116 711 aaPredicted RBP12.36□□□□□ -0.43
TMEM116-218ENST00000552839 FZD8Q9H461 694 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 CHST7Q9NS84 486 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 ANO10Q9NW15 660 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 ZDHHC7Q9NXF8 308 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 CTNND2Q9UQB3 1225 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 CEP250Q9BV73 2442 aa12.36□□□□□ -0.43
TMEM116-218ENST00000552839 SYCE3A1L190 88 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 TOM1L1O75674 476 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 CCDC192P0DO97 292 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 ITGA4P13612 1032 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 YARSP54577 528 aaKnown RBP12.35□□□□□ -0.43
TMEM116-218ENST00000552839 NLRP12P59046 1061 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 GPC5P78333 572 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 PAK1Q13153 545 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 MORC3Q14149 939 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 KNOP1Q1ED39 458 aaKnown RBP12.35□□□□□ -0.43
TMEM116-218ENST00000552839 VARS2Q5ST30 1063 aaKnown RBP12.35□□□□□ -0.43
TMEM116-218ENST00000552839 NT5DC1Q5TFE4 455 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 PARM1Q6UWI2 310 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 MPZL3Q6UWV2 235 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 CDR2LQ86X02 465 aaPredicted RBP12.35□□□□□ -0.43
TMEM116-218ENST00000552839 GUF1Q8N442 669 aaKnown RBP12.35□□□□□ -0.43
TMEM116-218ENST00000552839 MLKLQ8NB16 471 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 FGF14Q92915 247 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 B3GALT6Q96L58 329 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 GAD1Q99259 594 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 CCDC94Q9BW85 323 aaPredicted RBP12.35□□□□□ -0.43
TMEM116-218ENST00000552839 EIF2AQ9BY44 585 aaKnown RBP12.35□□□□□ -0.43
TMEM116-218ENST00000552839 GPR62Q9BZJ7 368 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 NAT10Q9H0A0 1025 aaKnown RBP12.35□□□□□ -0.43
TMEM116-218ENST00000552839 RNF39Q9H2S5 420 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 PDZD7Q9H5P4 517 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 UBN1Q9NPG3 1134 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 TNFSF13BQ9Y275 285 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 IPPQ9Y573 584 aa12.35□□□□□ -0.43
TMEM116-218ENST00000552839 NOTCH4Q99466 2003 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 KANSL1LA0AUZ9 987 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 ARL5CA6NH57 179 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 C1RP00736 705 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 MCF2P10911 925 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 RPL13P26373 211 aaKnown RBP12.34□□□□□ -0.43
TMEM116-218ENST00000552839 MLH1P40692 756 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 SCNN1GP51170 649 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 CYP2J2P51589 502 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 EHHADHQ08426 723 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 ZNF528Q3MIS6 628 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 FUT10Q6P4F1 479 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 TAS1R3Q7RTX0 852 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 GLIS3Q8NEA6 775 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 SPATA20Q8TB22 786 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 ZNF507Q8TCN5 953 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 SCFD1Q8WVM8 642 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 NELFBQ8WX92 580 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 SHDQ96IW2 340 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 ZFP42Q96MM3 310 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 FIZ1Q96SL8 496 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 ACO2Q99798 780 aaKnown RBP12.34□□□□□ -0.43
TMEM116-218ENST00000552839 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 DDX23Q9BUQ8 820 aaKnown RBP12.34□□□□□ -0.43
TMEM116-218ENST00000552839 FNIP2Q9P278 1114 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 CGNQ9P2M7 1197 aaKnown RBP12.34□□□□□ -0.43
TMEM116-218ENST00000552839 NCDNQ9UBB6 729 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 PARP2Q9UGN5 583 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 USP20Q9Y2K6 914 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 MTF2Q9Y483 593 aaPredicted RBP12.34□□□□□ -0.43
TMEM116-218ENST00000552839 HES2Q9Y543 173 aa12.34□□□□□ -0.43
TMEM116-218ENST00000552839 KIAA0391O15091 583 aaKnown RBP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 CLIC2O15247 247 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 LAMTOR5O43504 91 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 EXOC3O60645 756 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 ZMYND10O75800 440 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 PPP1R37O75864 691 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 CLSTN1O94985 981 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 FGFR1OPO95684 399 aaKnown RBP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 LDHAP00338 332 aaKnown RBP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 RPL17P18621 184 aaKnown RBP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 FSHRP23945 695 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 PRCPP42785 496 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 ATXN1P54253 815 aaKnown RBP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 OSTNP61366 133 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 SNRPFP62306 86 aaKnown RBP12.33□□□□□ -0.44
TMEM116-218ENST00000552839 TYRO3Q06418 890 aa12.33□□□□□ -0.44
TMEM116-218ENST00000552839 AMHR2Q16671 573 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms