RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 CNOT8Q9UFF9 292 aaKnown RBP8.72□□□□□ -1.01
CHPT1-208ENST00000552215 TNFSF13BQ9Y275 285 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 MROH7Q68CQ1 1323 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 CTAGE9A4FU28 777 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 ZMYND10O75800 440 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 CCDC130P13994 396 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 NDST1P52848 882 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 LIN9Q5TKA1 542 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 ZNF410Q86VK4 478 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 BRSK2Q8IWQ3 736 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 EMC1Q8N766 993 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 PXYLP1Q8TE99 480 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 IPO4Q8TEX9 1081 aaKnown RBP8.72□□□□□ -1.01
CHPT1-208ENST00000552215 ZNF516Q92618 1163 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 HHIPL1Q96JK4 782 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 AJAP1Q9UKB5 411 aaPredicted RBP8.72□□□□□ -1.01
CHPT1-208ENST00000552215 ARFGEF1Q9Y6D6 1849 aa8.72□□□□□ -1.01
CHPT1-208ENST00000552215 SLC16A3O15427 465 aaKnown RBP8.71□□□□□ -1.01
CHPT1-208ENST00000552215 LPXNO60711 386 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 CABYRO75952 493 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 SERPING1P05155 500 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 ACO1P21399 889 aaKnown RBP8.71□□□□□ -1.01
CHPT1-208ENST00000552215 TNNT3P45378 269 aaPredicted RBP8.71□□□□□ -1.01
CHPT1-208ENST00000552215 CUL2Q13617 745 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 PPP6R3Q5H9R7 873 aaPredicted RBP8.71□□□□□ -1.01
CHPT1-208ENST00000552215 ZPBP2Q6X784 338 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 CGRRF1Q99675 332 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 CARD6Q9BX69 1037 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 SIK2Q9H0K1 926 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 C11orf49Q9H6J7 331 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 CAPN11Q9UMQ6 739 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 FAN1Q9Y2M0 1017 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 SOAT2O75908 522 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 TAF6P49848 677 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 SURF1Q15526 300 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 MDH1BQ5I0G3 518 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 FBXO47Q5MNV8 452 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.71□□□□□ -1.01
CHPT1-208ENST00000552215 SIX6OS1Q8N1H7 587 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 ADAM32Q8TC27 787 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 NIF3L1Q9GZT8 377 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 KATNBL1Q9H079 304 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 TAS2R14Q9NYV8 317 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 ANAPC7Q9UJX3 599 aa8.71□□□□□ -1.01
CHPT1-208ENST00000552215 UBQLN1Q9UMX0 589 aaKnown RBP8.71□□□□□ -1.01
CHPT1-208ENST00000552215 PI4K2BG5E9Z4 385 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 DAPK3O43293 454 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 BNIP3LO60238 219 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 ADAMTS4O75173 837 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 ALDH2P05091 517 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 MCF2P10911 925 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 IGFBP6P24592 240 aaPredicted RBP8.71□□□□□ -1.02
CHPT1-208ENST00000552215 PAFAH1B1P43034 410 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 SNX1Q13596 522 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 HLTFQ14527 1009 aaKnown RBP eCLIP8.71□□□□□ -1.02
CHPT1-208ENST00000552215 TNS4Q8IZW8 715 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 FIZ1Q96SL8 496 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 SELENOOQ9BVL4 669 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 MYO1FO00160 1098 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 IGFBP4P22692 258 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 GGCXP38435 758 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 CDC42EP1Q00587 391 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 LPIN1Q14693 890 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 DNAJC24Q6P3W2 148 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 B4GALNT4Q76KP1 1039 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 ZNF571Q7Z3V5 609 aaPredicted RBP8.71□□□□□ -1.02
CHPT1-208ENST00000552215 C1orf127Q8N9H9 656 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 BADQ92934 168 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 DNAI2Q9GZS0 605 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 LACRTQ9GZZ8 138 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 DDX43Q9NXZ2 648 aaKnown RBP8.71□□□□□ -1.02
CHPT1-208ENST00000552215 ARHGAP20Q9P2F6 1191 aa8.71□□□□□ -1.02
CHPT1-208ENST00000552215 UQCRHLA0A096LP55 91 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 ARL5CA6NH57 179 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 MOXD2PA6NHM9 499 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 IFNB1P01574 187 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 UQCRHP07919 91 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 MAP3K7CLP57077 242 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 MTM1Q13496 603 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 SMAD1Q15797 465 aaKnown RBP8.7□□□□□ -1.02
CHPT1-208ENST00000552215 DCAF4L1Q3SXM0 396 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 SYCP2LQ5T4T6 812 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 FAM102AQ5T9C2 384 aaPredicted RBP8.7□□□□□ -1.02
CHPT1-208ENST00000552215 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.7□□□□□ -1.022e-8■■□□□ 14.5
CHPT1-208ENST00000552215 EPM2AIP1Q7L775 607 aaPredicted RBP8.7□□□□□ -1.02
CHPT1-208ENST00000552215 GIPC2Q8TF65 315 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 RIN2Q8WYP3 895 aaPredicted RBP8.7□□□□□ -1.02
CHPT1-208ENST00000552215 UBXN4Q92575 508 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 HSPH1Q92598 858 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 ZMAT2Q96NC0 199 aaKnown RBP8.7□□□□□ -1.02
CHPT1-208ENST00000552215 CALN1Q9BXU9 219 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 SIPA1L1O43166 1804 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 ZMYM2Q9UBW7 1377 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 UBE4BO95155 1302 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 PODXLO00592 558 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 HSPA8P11142 646 aaKnown RBP8.7□□□□□ -1.02
CHPT1-208ENST00000552215 DESP17661 470 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 GALCP54803 685 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 CCZ1BP86790 482 aa8.7□□□□□ -1.02
CHPT1-208ENST00000552215 CCZ1P86791 482 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms