RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 AZI2Q9H6S1 392 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 SRA1Q9HD15 236 aaKnown RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 FGFR1OP2Q9NVK5 253 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 EURLQ9NYK6 297 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 PLK2Q9NYY3 685 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 LGALS13Q9UHV8 139 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 CCPG1Q9ULG6 757 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 ANGEL1Q9UNK9 670 aaKnown RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 STK38LQ9Y2H1 464 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 FAM32AQ9Y421 112 aaKnown RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 RPTORQ8N122 1335 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 KDM3BQ7LBC6 1761 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 TECPR2O15040 1411 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 ADAMTS13Q76LX8 1427 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 ECM29Q5VYK3 1845 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 WNK3Q9BYP7 1800 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 GNAT3A8MTJ3 354 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 MATN2O00339 956 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 DLL1O00548 723 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 SOX1O00570 391 aaPredicted RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 CPLX1O14810 134 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 FSCN2O14926 492 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 KIAA0391O15091 583 aaKnown RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 EPHB6O15197 1021 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 P4HA2O15460 535 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 TLR2O60603 784 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 RNASEH1O60930 286 aaKnown RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 ADAM23O75077 832 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 ZBED4O75132 1171 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 ENTPD5O75356 428 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 CSDE1O75534 798 aaKnown RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 RHOBTB3O94955 611 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 RPN1P04843 607 aaKnown RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 CD48P09326 243 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 SPATA31C1P0DKV0 1188 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 COL6A2P12110 1019 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 CCNE1P24864 410 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 HOXA7P31268 230 aaPredicted RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 FOXN2P32314 431 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 SLC1A4P43007 532 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 CEBPAP49715 358 aaPredicted RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 NEK3P51956 506 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 PMS2P54278 862 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 FCGRTP55899 365 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 ATP2C1P98194 919 aaPredicted RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 RNASELQ05823 741 aaKnown RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 FAAP100Q0VG06 881 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 TEFQ10587 303 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 ZNF423Q2M1K9 1284 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 SLC45A4Q5BKX6 768 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 DPY19L2P1Q6NXN4 242 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 APOA5Q6Q788 366 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 UGT2A3Q6UWM9 527 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 DSTYKQ6XUX3 929 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 SEPT14Q6ZU15 432 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 MIGA2Q7L4E1 593 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 DAAM2Q86T65 1068 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 FBXO11Q86XK2 927 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 SFR1Q86XK3 245 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 LRRC49Q8IUZ0 686 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 DIS3L2Q8IYB7 885 aaKnown RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 C4orf32Q8N8J7 132 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 NCOA7Q8NI08 942 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 GDAP1Q8TB36 358 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 DENND1AQ8TEH3 1009 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 UBLCP1Q8WVY7 318 aaPredicted RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 C10orf82Q8WW14 230 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 MPP4Q96JB8 637 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 VPS50Q96JG6 964 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 TMEM87BQ96K49 555 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 SRPK1Q96SB4 655 aaKnown RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 DBNDD2Q9BQY9 259 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 TUBGCP2Q9BSJ2 902 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 NRSN2Q9GZP1 204 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 KIAA1683Q9H0B3 1180 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 GBA3Q9H227 469 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 CLEC4MQ9H2X3 399 aaPredicted RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 SYNCQ9H7C4 482 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 CLK4Q9HAZ1 481 aaKnown RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 USP40Q9NVE5 1235 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 GRHL1Q9NZI5 618 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 KLHL14Q9P2G3 628 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 SAP30BPQ9UHR5 308 aaKnown RBP5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 PCDHB2Q9Y5E7 798 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 ACTL7BQ9Y614 415 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 AK5Q9Y6K8 562 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 USH1CQ9Y6N9 552 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 MYH7P12883 1935 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 PITPNM2Q9BZ72 1349 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 FLT4P35916 1363 aa5.63□□□□□ -1.51
LSM3P2-201ENST00000551246 MYH7BA7E2Y1 1941 aa5.62□□□□□ -1.51
LSM3P2-201ENST00000551246 MYH8P13535 1937 aa5.62□□□□□ -1.51
LSM3P2-201ENST00000551246 A0A0A6YYK5 440 aaPredicted RBP5.62□□□□□ -1.51
LSM3P2-201ENST00000551246 KRBA1A5PL33 1030 aa5.62□□□□□ -1.51
LSM3P2-201ENST00000551246 TRIM75PA6NK02 468 aa5.62□□□□□ -1.51
LSM3P2-201ENST00000551246 A8MXQ7 604 aa5.62□□□□□ -1.51
LSM3P2-201ENST00000551246 PGRMC1O00264 195 aaKnown RBP5.62□□□□□ -1.51
LSM3P2-201ENST00000551246 RGS16O15492 202 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms