RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 LRIT1Q9P2V4 623 aa6.11□□□□□ -1.43
GPN3-209ENST00000551079 PRAMEF33A0A0G2JMD5 474 aa6.1□□□□□ -1.43
GPN3-209ENST00000551079 PRAMEF10O60809 474 aa6.1□□□□□ -1.43
GPN3-209ENST00000551079 ZRANB2O95218 330 aaKnown RBP eCLIP6.1□□□□□ -1.43
GPN3-209ENST00000551079 MALP21145 153 aa6.1□□□□□ -1.43
GPN3-209ENST00000551079 CLK3P49761 638 aaKnown RBP6.1□□□□□ -1.43
GPN3-209ENST00000551079 ZNF169Q14929 603 aaPredicted RBP6.1□□□□□ -1.43
GPN3-209ENST00000551079 FLYWCH1Q4VC44 716 aa6.1□□□□□ -1.43
GPN3-209ENST00000551079 KHDC1Q4VXA5 237 aaKnown RBP6.1□□□□□ -1.43
GPN3-209ENST00000551079 DPY19L2P1Q6NXN4 242 aa6.1□□□□□ -1.43
GPN3-209ENST00000551079 SSH3Q8TE77 659 aa6.1□□□□□ -1.43
GPN3-209ENST00000551079 KLHL32Q96NJ5 620 aa6.1□□□□□ -1.43
GPN3-209ENST00000551079 VRK1Q99986 396 aaPredicted RBP6.1□□□□□ -1.43
GPN3-209ENST00000551079 KCTD5Q9NXV2 234 aa6.1□□□□□ -1.43
GPN3-209ENST00000551079 POLHQ9Y253 713 aa6.1□□□□□ -1.43
GPN3-209ENST00000551079 ARIH2O95376 493 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 SMARCA1P28370 1054 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 CYP2C19P33261 490 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 PLA2G5P39877 138 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 RPS7P62081 194 aaKnown RBP6.09□□□□□ -1.43
GPN3-209ENST00000551079 MRPS35P82673 323 aaKnown RBP6.09□□□□□ -1.43
GPN3-209ENST00000551079 DSC2Q02487 901 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 FPGSQ05932 587 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 THEMIS2Q5TEJ8 643 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 ADGRG3Q86Y34 549 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 PDSS2Q86YH6 399 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 C3orf20Q8ND61 904 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 SIMC1Q8NDZ2 872 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 TMIEQ8NEW7 156 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 IMPG2Q9BZV3 1241 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 INTS13Q9NVM9 706 aa6.09□□□□□ -1.43
GPN3-209ENST00000551079 PCSK5Q92824 1860 aa6.09□□□□□ -1.44
GPN3-209ENST00000551079 SALL3Q9BXA9 1300 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 CCDC195A0A1B0GUA6 201 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 F2RL2O00254 374 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 SLC16A6O15403 523 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 PEX1O43933 1283 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 GNAI3P08754 354 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 FTH1P19P0C7X4 201 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 GNAI1P63096 354 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 POU6F2P78424 691 aaPredicted RBP6.08□□□□□ -1.44
GPN3-209ENST00000551079 SNAPC2Q13487 334 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 DYRK1AQ13627 763 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 CCDC93Q567U6 631 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 BRDTQ58F21 947 aaPredicted RBP6.08□□□□□ -1.44
GPN3-209ENST00000551079 TMEM240Q5SV17 173 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 SLC4A10Q6U841 1118 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 CFAP52Q8N1V2 620 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 PDPRQ8NCN5 879 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 SLC17A8Q8NDX2 589 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 ACTRT2Q8TDY3 377 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 TMEM125Q96AQ2 219 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 DUSP26Q9BV47 211 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 BRD9Q9H8M2 597 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 RLIMQ9NVW2 624 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 CTTNBP2NLQ9P2B4 639 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 TLK1Q9UKI8 766 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 SLC45A2Q9UMX9 530 aa6.08□□□□□ -1.44
GPN3-209ENST00000551079 NOP58Q9Y2X3 529 aaKnown RBP6.08□□□□□ -1.44
GPN3-209ENST00000551079 TOR1BO14657 336 aa6.07□□□□□ -1.44
GPN3-209ENST00000551079 SRGNP10124 158 aa6.07□□□□□ -1.44
GPN3-209ENST00000551079 PDCP20941 246 aa6.07□□□□□ -1.44
GPN3-209ENST00000551079 FOLR3P41439 243 aa6.07□□□□□ -1.44
GPN3-209ENST00000551079 RARRES1P49788 294 aa6.07□□□□□ -1.44
GPN3-209ENST00000551079 ANXA11P50995 505 aaKnown RBP6.07□□□□□ -1.44
GPN3-209ENST00000551079 FXR1P51114 621 aaKnown RBP eCLIP6.07□□□□□ -1.44
GPN3-209ENST00000551079 SIM1P81133 766 aaPredicted RBP6.07□□□□□ -1.44
GPN3-209ENST00000551079 SF3B3Q15393 1217 aaKnown RBP6.07□□□□□ -1.44
GPN3-209ENST00000551079 PREPLQ4J6C6 727 aaPredicted RBP6.07□□□□□ -1.44
GPN3-209ENST00000551079 ZBTB46Q86UZ6 589 aa6.07□□□□□ -1.44
GPN3-209ENST00000551079 NELL1Q92832 810 aa6.07□□□□□ -1.44
GPN3-209ENST00000551079 SCAMP4Q969E2 229 aa6.07□□□□□ -1.44
GPN3-209ENST00000551079 CHMP4CQ96CF2 233 aa6.07□□□□□ -1.44
GPN3-209ENST00000551079 SMOQ99835 787 aa6.07□□□□□ -1.44
GPN3-209ENST00000551079 PTGFRNQ9P2B2 879 aa6.07□□□□□ -1.44
GPN3-209ENST00000551079 COX11Q9Y6N1 276 aa6.07□□□□□ -1.44
GPN3-209ENST00000551079 NT5C1B-RDH14C9J2C7 533 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 E7ENX8 843 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 YY2O15391 372 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 SUN1O94901 812 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 ELLP55199 621 aaPredicted RBP6.06□□□□□ -1.44
GPN3-209ENST00000551079 EXOSC10Q01780 885 aaKnown RBP6.06□□□□□ -1.44
GPN3-209ENST00000551079 TAP2Q03519 686 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 HLXQ14774 488 aaPredicted RBP6.06□□□□□ -1.44
GPN3-209ENST00000551079 VWA1Q6PCB0 445 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 USP45Q70EL2 814 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 RD3Q7Z3Z2 195 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 PRR18Q8N4B5 295 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 CPA6Q8N4T0 437 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 SNX19Q92543 992 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 BBC3Q96PG8 261 aaPredicted RBP6.06□□□□□ -1.44
GPN3-209ENST00000551079 TRIB1Q96RU8 372 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 HEPHQ9BQS7 1158 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 VSX1Q9NZR4 365 aaPredicted RBP6.06□□□□□ -1.44
GPN3-209ENST00000551079 FOXJ2Q9P0K8 574 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 CFAP97Q9P2B7 532 aa6.06□□□□□ -1.44
GPN3-209ENST00000551079 LUC7L2Q9Y383 392 aaKnown RBP6.06□□□□□ -1.44
GPN3-209ENST00000551079 ARHGEF17Q96PE2 2063 aaPredicted RBP6.06□□□□□ -1.44
GPN3-209ENST00000551079 ANKRD62A6NC57 917 aa6.05□□□□□ -1.44
GPN3-209ENST00000551079 PROM1O43490 865 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms