RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 FGF14Q92915 247 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 SHDQ96IW2 340 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 ZSCAN31Q96LW9 406 aaPredicted RBP8.36□□□□□ -1.07
NEK3-201ENST00000550331 CCDC94Q9BW85 323 aaPredicted RBP8.36□□□□□ -1.07
NEK3-201ENST00000550331 MRPL4Q9BYD3 311 aaKnown RBP8.36□□□□□ -1.07
NEK3-201ENST00000550331 CDT1Q9H211 546 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 C17orf75Q9HAS0 396 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 PTPRHQ9HD43 1115 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 DDX19AQ9NUU7 478 aaKnown RBP8.36□□□□□ -1.07
NEK3-201ENST00000550331 SLC38A7Q9NVC3 462 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 DLGAP2Q9P1A6 1054 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 ARHGAP28Q9P2N2 729 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 NCDNQ9UBB6 729 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 POLIQ9UNA4 740 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 KIAA1024Q9UPX6 916 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 USP20Q9Y2K6 914 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 RBM19Q9Y4C8 960 aaKnown RBP8.36□□□□□ -1.07
NEK3-201ENST00000550331 CDY1Q9Y6F8 540 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 CFAP47Q6ZTR5 3102 aa8.36□□□□□ -1.07
NEK3-201ENST00000550331 BAHCC1Q9P281 2608 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 USP24Q9UPU5 2620 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 SMIM28A0A1B0GU29 152 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 CCDC169A6NNP5 214 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 SYN3O14994 580 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 CCL16O15467 120 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 MCF2P10911 925 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 PROZP22891 400 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 PRPHP41219 470 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 PEX3P56589 373 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 GPC5P78333 572 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 NTHL1P78549 312 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 PFKPQ01813 784 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 DMP1Q13316 513 aaPredicted RBP8.35□□□□□ -1.07
NEK3-201ENST00000550331 ZNF568Q3ZCX4 644 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 PABPC1LQ4VXU2 614 aaKnown RBP8.35□□□□□ -1.07
NEK3-201ENST00000550331 KRT79Q5XKE5 535 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 SLC8B1Q6J4K2 584 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 CD300LGQ6UXG3 332 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 ALKAL1Q6UXT8 129 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 RSPO2Q6UXX9 243 aaPredicted RBP8.35□□□□□ -1.07
NEK3-201ENST00000550331 C1orf210Q8IVY1 113 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 DAW1Q8N136 415 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 Q8N3U1 123 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 CEP120Q8N960 986 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 EHBP1Q8NDI1 1231 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 C3orf58Q8NDZ4 430 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 PJA1Q8NG27 643 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 ACO2Q99798 780 aaKnown RBP8.35□□□□□ -1.07
NEK3-201ENST00000550331 RPP25Q9BUL9 199 aaKnown RBP8.35□□□□□ -1.07
NEK3-201ENST00000550331 DDX23Q9BUQ8 820 aaKnown RBP8.35□□□□□ -1.07
NEK3-201ENST00000550331 TIPINQ9BVW5 301 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 KMT5AQ9NQR1 393 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 AVENQ9NQS1 362 aaPredicted RBP8.35□□□□□ -1.07
NEK3-201ENST00000550331 KCNG1Q9UIX4 513 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 DNM3Q9UQ16 869 aa8.35□□□□□ -1.07
NEK3-201ENST00000550331 DOCK6Q96HP0 2047 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 KANSL1LA0AUZ9 987 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 ARHGEF37A1IGU5 675 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 E9PMD0 336 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 PODXLO00592 558 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 ABLIM1O14639 778 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 HIP1RO75146 1068 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 ECI2O75521 394 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 ABLIM3O94929 683 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 KCNE1P15382 129 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 IGFBP6P24592 240 aaPredicted RBP8.34□□□□□ -1.07
NEK3-201ENST00000550331 GUCY2CP25092 1073 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 TKTP29401 623 aaKnown RBP8.34□□□□□ -1.07
NEK3-201ENST00000550331 RPL9P32969 192 aaKnown RBP8.34□□□□□ -1.07
NEK3-201ENST00000550331 TOB1P50616 345 aaPredicted RBP8.34□□□□□ -1.07
NEK3-201ENST00000550331 ATXN1P54253 815 aaKnown RBP8.34□□□□□ -1.07
NEK3-201ENST00000550331 ROR1Q01973 937 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 PRKCQQ04759 706 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 SOX4Q06945 474 aaPredicted RBP8.34□□□□□ -1.07
NEK3-201ENST00000550331 MAPK7Q13164 816 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 MLF2Q15773 248 aaPredicted RBP8.34□□□□□ -1.07
NEK3-201ENST00000550331 MPZL3Q6UWV2 235 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 TAS1R3Q7RTX0 852 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 GPR161Q8N6U8 529 aaKnown RBP8.34□□□□□ -1.07
NEK3-201ENST00000550331 ZNF461Q8TAF7 563 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 ITFG1Q8TB96 612 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 SPIRE2Q8WWL2 714 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 SCARF2Q96GP6 870 aaPredicted RBP8.34□□□□□ -1.07
NEK3-201ENST00000550331 BORCS6Q96GS4 357 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 ACAP3Q96P50 834 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 NTPCRQ9BSD7 190 aaKnown RBP8.34□□□□□ -1.07
NEK3-201ENST00000550331 OSBPL6Q9BZF3 934 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 GOLGA2P5Q9HBQ8 144 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 POLD4Q9HCU8 107 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 GDE1Q9NZC3 331 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 CNTN3Q9P232 1028 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 DNMT3BQ9UBC3 853 aaKnown RBP8.34□□□□□ -1.07
NEK3-201ENST00000550331 CDV3Q9UKY7 258 aaKnown RBP8.34□□□□□ -1.07
NEK3-201ENST00000550331 PCDHB6Q9Y5E3 794 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.34□□□□□ -1.07
NEK3-201ENST00000550331 RALGAPA1Q6GYQ0 2036 aa8.34□□□□□ -1.07
NEK3-201ENST00000550331 WDR27A2RRH5 827 aa8.33□□□□□ -1.08
NEK3-201ENST00000550331 DCDC2BA2VCK2 349 aa8.33□□□□□ -1.08
NEK3-201ENST00000550331 PP2D1A8MPX8 630 aa8.33□□□□□ -1.08
NEK3-201ENST00000550331 H7C4K7 107 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms