RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 UBE2ZQ9H832 354 aaPredicted RBP24.31■■□□□ 1.48
BRF1-216ENST00000550208 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.31■■□□□ 1.48
BRF1-216ENST00000550208 FNIP2Q9P278 1114 aa24.31■■□□□ 1.48
BRF1-216ENST00000550208 TIMM13Q9Y5L4 95 aaPredicted RBP24.31■■□□□ 1.48
BRF1-216ENST00000550208 GLP2RO95838 553 aa24.3■■□□□ 1.48
BRF1-216ENST00000550208 CST3P01034 146 aaPredicted RBP24.3■■□□□ 1.48
BRF1-216ENST00000550208 VAMP7P51809 220 aa24.3■■□□□ 1.48
BRF1-216ENST00000550208 CLDN10P78369 228 aa24.3■■□□□ 1.48
BRF1-216ENST00000550208 MRPL58Q14197 206 aaKnown RBP24.3■■□□□ 1.48
BRF1-216ENST00000550208 VARS2Q5ST30 1063 aaKnown RBP24.3■■□□□ 1.48
BRF1-216ENST00000550208 C1orf220Q5T0J3 134 aa24.3■■□□□ 1.48
BRF1-216ENST00000550208 COG5Q9UP83 839 aa24.3■■□□□ 1.48
BRF1-216ENST00000550208 REV3LO60673 3130 aa24.3■■□□□ 1.48
BRF1-216ENST00000550208 ADAM12O43184 909 aa24.29■■□□□ 1.48
BRF1-216ENST00000550208 PAX3P23760 479 aa24.29■■□□□ 1.48
BRF1-216ENST00000550208 NLRP12P59046 1061 aa24.29■■□□□ 1.48
BRF1-216ENST00000550208 PAK1Q13153 545 aa24.29■■□□□ 1.48
BRF1-216ENST00000550208 RSPO2Q6UXX9 243 aaPredicted RBP24.29■■□□□ 1.48
BRF1-216ENST00000550208 PALB2Q86YC2 1186 aa24.29■■□□□ 1.48
BRF1-216ENST00000550208 MLKLQ8NB16 471 aa24.29■■□□□ 1.48
BRF1-216ENST00000550208 APPL2Q8NEU8 664 aa24.29■■□□□ 1.48
BRF1-216ENST00000550208 MKNK1Q9BUB5 465 aa24.29■■□□□ 1.48
BRF1-216ENST00000550208 HCFC2Q9Y5Z7 792 aa24.29■■□□□ 1.48
BRF1-216ENST00000550208 BICDL2A1A5D9 508 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 KPNA7A9QM74 516 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 CYB561D2O14569 222 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 C4BPAP04003 597 aaKnown RBP24.28■■□□□ 1.48
BRF1-216ENST00000550208 KRT13P13646 458 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 EPCAMP16422 314 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 TFF2Q03403 129 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 BFSP1Q12934 665 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 PDXDC1Q6P996 788 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 TMEM184AQ6ZMB5 413 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 RBM43Q6ZSC3 357 aaKnown RBP24.28■■□□□ 1.48
BRF1-216ENST00000550208 ANKS3Q6ZW76 656 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 INTS8Q75QN2 995 aaKnown RBP24.28■■□□□ 1.48
BRF1-216ENST00000550208 PPFIBP1Q86W92 1011 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 ZNF560Q96MR9 790 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 CLEC1BQ9P126 229 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 MTRRQ9UBK8 725 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 BARX2Q9UMQ3 279 aaPredicted RBP24.28■■□□□ 1.48
BRF1-216ENST00000550208 R3HCC1Q9Y3T6 440 aaKnown RBP24.28■■□□□ 1.48
BRF1-216ENST00000550208 BACE2Q9Y5Z0 518 aa24.28■■□□□ 1.48
BRF1-216ENST00000550208 TBC1D4O60343 1298 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 TBX10O75333 385 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 ADH1AP07327 375 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 TRIM49P0CI25 452 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 TRIM49CP0CI26 452 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 EPB41P11171 864 aaKnown RBP24.27■■□□□ 1.48
BRF1-216ENST00000550208 KCNA5P22460 613 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 PNPLA4P41247 253 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 NDUFV1P49821 464 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 CLCN4P51793 760 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 AP3M2P53677 418 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 MCCD1P59942 119 aaPredicted RBP24.27■■□□□ 1.48
BRF1-216ENST00000550208 CREMQ03060 361 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 SV2CQ496J9 727 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 LRRC52Q8N7C0 313 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 MED15Q96RN5 788 aa24.27■■□□□ 1.48
BRF1-216ENST00000550208 H3BQ06 376 aaPredicted RBP24.26■■□□□ 1.47
BRF1-216ENST00000550208 H7C4K7 107 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 IKBKBO14920 756 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 PHACTR2O75167 634 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 SPATA31D3P0C874 917 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 TYMPP19971 482 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 OR1D2P34982 312 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 DPCR1Q3MIW9 517 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 CCDC183Q5T5S1 534 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 TDRD10Q5VZ19 366 aaKnown RBP24.26■■□□□ 1.47
BRF1-216ENST00000550208 FOXR2Q6PJQ5 311 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 SPATA31D4Q6ZUB0 917 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 FILIP1Q7Z7B0 1213 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 HPDLQ96IR7 371 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 CEP63Q96MT8 703 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 TMEM63CQ9P1W3 806 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 THEGQ9P2T0 379 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 RWDD2AQ9UIY3 292 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 CDY1Q9Y6F8 540 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 COL6A3P12111 3177 aa24.26■■□□□ 1.47
BRF1-216ENST00000550208 FSD2A1L4K1 749 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 SLC16A3O15427 465 aaKnown RBP24.25■■□□□ 1.47
BRF1-216ENST00000550208 OAZ2O95190 189 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 ODC1P11926 461 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 PPP3CAQ08209 521 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 BIRC3Q13489 604 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 TRPC3Q13507 836 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 CLUL1Q15846 466 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 CTXN3Q4LDR2 81 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 LILRA6Q6PI73 481 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 SV2AQ7L0J3 742 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 USP37Q86T82 979 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 CASP10Q92851 521 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 SRRTQ9BXP5 876 aaKnown RBP24.25■■□□□ 1.47
BRF1-216ENST00000550208 FBXL5Q9UKA1 691 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 BRWD1Q9NSI6 2320 aa24.25■■□□□ 1.47
BRF1-216ENST00000550208 TGM5O43548 720 aa24.24■■□□□ 1.47
BRF1-216ENST00000550208 VNN1O95497 513 aa24.24■■□□□ 1.47
BRF1-216ENST00000550208 CYP11A1P05108 521 aa24.24■■□□□ 1.47
BRF1-216ENST00000550208 GCLMP48507 274 aa24.24■■□□□ 1.47
BRF1-216ENST00000550208 ARPP19P56211 112 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms