RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 TEX28O15482 410 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 LINC01565O15544 149 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 C4BPAP04003 597 aaKnown RBP12.85□□□□□ -0.35
PFDN5-208ENST00000549995 ITGB3P05106 788 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 ADH1AP07327 375 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 TMEM191BP0C7N4 346 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 TKTP29401 623 aaKnown RBP12.85□□□□□ -0.35
PFDN5-208ENST00000549995 MARSP56192 900 aaKnown RBP12.85□□□□□ -0.35
PFDN5-208ENST00000549995 TFAMQ00059 246 aaKnown RBP12.85□□□□□ -0.35
PFDN5-208ENST00000549995 BFSP1Q12934 665 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 CCDC85BQ15834 202 aaPredicted RBP12.85□□□□□ -0.35
PFDN5-208ENST00000549995 PSMD5Q16401 504 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 LEXMQ3ZCV2 418 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 SV2CQ496J9 727 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 VARS2Q5ST30 1063 aaKnown RBP12.85□□□□□ -0.35
PFDN5-208ENST00000549995 TRAPPC11Q7Z392 1133 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 MLKLQ8NB16 471 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 MICAL1Q8TDZ2 1067 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 RIN2Q8WYP3 895 aaPredicted RBP12.85□□□□□ -0.35
PFDN5-208ENST00000549995 ZNF516Q92618 1163 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 HLA-CQ95604 372 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 CEP63Q96MT8 703 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 MED15Q96RN5 788 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 FNBP1Q96RU3 617 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 TSG101Q99816 390 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 DZANK1Q9NVP4 752 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 FRMD4BQ9Y2L6 1034 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 NUB1Q9Y5A7 615 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 HCFC2Q9Y5Z7 792 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 PTPRDP23468 1912 aa12.85□□□□□ -0.35
PFDN5-208ENST00000549995 BICDL2A1A5D9 508 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 TRIM49BA6NDI0 452 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 I3L4J1 428 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 CETN3O15182 167 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 TNNC2P02585 160 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 POU2F2P09086 479 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 FAM163BP0C2L3 166 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 POLR2BP30876 1174 aaKnown RBP12.84□□□□□ -0.35
PFDN5-208ENST00000549995 RBP5P82980 135 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 PAK1Q13153 545 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 RAB33AQ14088 237 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 ZACNQ401N2 412 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 RTL10Q7L3V2 364 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 DPH6Q7L8W6 267 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 USP37Q86T82 979 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 FAM186BQ8IYM0 893 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 RDH13Q8NBN7 331 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 APPL2Q8NEU8 664 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 CMASQ8NFW8 434 aaPredicted RBP12.84□□□□□ -0.35
PFDN5-208ENST00000549995 ATXN2LQ8WWM7 1075 aaKnown RBP12.84□□□□□ -0.35
PFDN5-208ENST00000549995 CASP10Q92851 521 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 B3GALT6Q96L58 329 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 SENP8Q96LD8 212 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 XYLT2Q9H1B5 865 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 RWDD2AQ9UIY3 292 aa12.84□□□□□ -0.35
PFDN5-208ENST00000549995 KPNA7A9QM74 516 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 H7C4K7 107 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 BIN1O00499 593 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 PER2O15055 1255 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 PMM2O15305 246 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 ABLIM3O94929 683 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 SRGAP2BP0DMP2 458 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 DLATP10515 647 aaKnown RBP12.83□□□□□ -0.36
PFDN5-208ENST00000549995 ODC1P11926 461 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 HOXB8P17481 243 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-208ENST00000549995 TNNI1P19237 187 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 PTMSP20962 102 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 ATICP31939 592 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 GTF2H1P32780 548 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 VAMP7P51809 220 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 NLRP12P59046 1061 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 DLG4P78352 724 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 DLX2Q07687 328 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-208ENST00000549995 TDRD10Q5VZ19 366 aaKnown RBP12.83□□□□□ -0.36
PFDN5-208ENST00000549995 LMBRD2Q68DH5 695 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-208ENST00000549995 SCARA3Q6AZY7 606 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 ZNF280DQ6N043 979 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 KIAA1841Q6NSI8 718 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 ANKRD54Q6NXT1 300 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 PRSS55Q6UWB4 352 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-208ENST00000549995 RSPO2Q6UXX9 243 aaPredicted RBP12.83□□□□□ -0.36
PFDN5-208ENST00000549995 FRMD5Q7Z6J6 570 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 FILIP1Q7Z7B0 1213 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 TOP6BLQ8N6T0 577 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 SMRP1Q8NCR6 262 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 NELFBQ8WX92 580 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 CCDC127Q96BQ5 260 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 FAM84AQ96KN4 292 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 POP1Q99575 1024 aaKnown RBP12.83□□□□□ -0.36
PFDN5-208ENST00000549995 PRDM6Q9NQX0 595 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 CLDND1Q9NY35 253 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 FBXW11Q9UKB1 542 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 DSEQ9UL01 958 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 MAFFQ9ULX9 164 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 AGAP1Q9UPQ3 857 aa12.83□□□□□ -0.36
PFDN5-208ENST00000549995 ADAM12O43184 909 aa12.82□□□□□ -0.36
PFDN5-208ENST00000549995 VNN1O95497 513 aa12.82□□□□□ -0.36
PFDN5-208ENST00000549995 EPB41P11171 864 aaKnown RBP12.82□□□□□ -0.36
PFDN5-208ENST00000549995 ERCC5P28715 1186 aaPredicted RBP12.82□□□□□ -0.36
PFDN5-208ENST00000549995 HOXA9P31269 272 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms