RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 MRPL4Q9BYD3 311 aaKnown RBP5.29□□□□□ -1.56
SCAF11-212ENST00000549162 CWH43Q9H720 699 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 PPCSQ9HAB8 311 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 TRPC7Q9HCX4 862 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 PRDM4Q9UKN5 801 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 NEU3Q9UQ49 428 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 NAALADL1Q9UQQ1 740 aa5.29□□□□□ -1.56
SCAF11-212ENST00000549162 EVPLQ92817 2033 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 ATP9AO75110 1047 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 SERPING1P05155 500 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 RB1P06400 928 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 FERP16591 822 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 TEAD1P28347 426 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 SLC1A1P43005 524 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 MRPL19P49406 292 aaKnown RBP5.28□□□□□ -1.56
SCAF11-212ENST00000549162 COPAP53621 1224 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 DBN1Q16643 649 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 PPP1R26Q5T8A7 1209 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-212ENST00000549162 MANEALQ5VSG8 457 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 C16orf46Q6P387 395 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 C11orf57Q6ZUT1 292 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-212ENST00000549162 REXO1L1PQ8IX06 675 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 ZNF683Q8IZ20 524 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 CLMNQ96JQ2 1002 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 C8orf48Q96LL4 319 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 DEPDC7Q96QD5 511 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 CHST7Q9NS84 486 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 WDR35Q9P2L0 1181 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 KANSL3Q9P2N6 904 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 UVRAGQ9P2Y5 699 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 SSX2IPQ9Y2D8 614 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 TRIP12Q14669 1992 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-212ENST00000549162 IGLV3-10A0A075B6K4 115 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 BACH1O14867 736 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 GAS7O60861 476 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 CYP2C8P10632 490 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 STAT6P42226 847 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 GYS2P54840 703 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 PCDH1Q08174 1060 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 KCTD2Q14681 263 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 MTERF2Q49AM1 385 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 ARHGEF16Q5VV41 709 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 TRIM65Q6PJ69 517 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 MIER3Q7Z3K6 550 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 DPP9Q86TI2 863 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 CHCHD4Q8N4Q1 142 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 MSANTD4Q8NCY6 345 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 CFAP61Q8NHU2 1237 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 PEX13Q92968 403 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 DYDC2Q96IM9 177 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 LMLNQ96KR4 655 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 MCMBPQ9BTE3 642 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 MIS12Q9H081 205 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 RRAGCQ9HB90 399 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 EXOC1Q9NV70 894 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 SLC38A7Q9NVC3 462 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 PPARGC1AQ9UBK2 798 aaKnown RBP5.28□□□□□ -1.56
SCAF11-212ENST00000549162 ABHD14A-ACY1A0A1B0GW23 586 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 HHLA1C9JL84 531 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 FLOT1O75955 427 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 VNN1O95497 513 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 SSBP05455 408 aaKnown RBP eCLIP5.28□□□□□ -1.56
SCAF11-212ENST00000549162 CCDC172P0C7W6 258 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 IGFBP4P22692 258 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 DDX6P26196 483 aaKnown RBP eCLIP5.28□□□□□ -1.56
SCAF11-212ENST00000549162 GBP1P32455 592 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 PCK1P35558 622 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 ASPAP45381 313 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 PHKA2P46019 1235 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 HNRNPFP52597 415 aaKnown RBP5.28□□□□□ -1.56
SCAF11-212ENST00000549162 CHMP4BP1P59074 171 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 NOP14P78316 857 aaKnown RBP5.28□□□□□ -1.56
SCAF11-212ENST00000549162 GRIK3Q13003 919 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 ORC1Q13415 861 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 FBXO47Q5MNV8 452 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 WDR45BQ5MNZ6 344 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 ANKRD40Q6AI12 368 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 CNKSR3Q6P9H4 555 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 ANKS3Q6ZW76 656 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 CTU1Q7Z7A3 348 aaKnown RBP5.28□□□□□ -1.56
SCAF11-212ENST00000549162 TMEM110Q86TL2 294 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 RASGRP3Q8IV61 690 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 ACTRT1Q8TDG2 376 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 GPKOWQ92917 476 aaPredicted RBP eCLIP5.28□□□□□ -1.564e-7■■■□□ 15.4
SCAF11-212ENST00000549162 BRD8Q9H0E9 1235 aa5.28□□□□□ -1.56
SCAF11-212ENST00000549162 A0A0U1RQF3 1178 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 ESYT3A0FGR9 886 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 AKR1B10O60218 316 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 SIN3BO75182 1162 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 CSNK1DP48730 415 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 CCT2P78371 535 aaKnown RBP5.27□□□□□ -1.57
SCAF11-212ENST00000549162 SP3Q02447 781 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 KRT31Q15323 416 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 SLC27A1Q6PCB7 646 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 LRRC49Q8IUZ0 686 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 LRRC8AQ8IWT6 810 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 CCDC144CPQ8IYA2 1237 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 ZNF784Q8NCA9 323 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-212ENST00000549162 GSTCDQ8NEC7 633 aa5.27□□□□□ -1.57
SCAF11-212ENST00000549162 BSNDQ8WZ55 320 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms