RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PI4KBQ9UBF8 816 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 FAM198AQ9UFP1 575 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 NUMBLQ9Y6R0 609 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 KLRC2P26717 231 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 ADSSP30520 456 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 SARNPP82979 210 aaKnown RBP14.54□□□□□ -0.08
HDAC7-228ENST00000548938 SNRNP35Q16560 246 aaKnown RBP14.54□□□□□ -0.08
HDAC7-228ENST00000548938 WASHC2DQ5SRD0 308 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 CCDC174Q6PII3 467 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 B3GNT9Q6UX72 402 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 CCDC125Q86Z20 511 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 MCOLN2Q8IZK6 566 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 CFAP57Q96MR6 1250 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 NT5C1BQ96P26 610 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.54□□□□□ -0.08
HDAC7-228ENST00000548938 UMODL1Q5DID0 1318 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 IPO5O00410 1097 aaKnown RBP14.54□□□□□ -0.08
HDAC7-228ENST00000548938 PMM2O15305 246 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 SLC16A4O15374 487 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 TAS2R40P59535 323 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 MRPS35P82673 323 aaKnown RBP14.54□□□□□ -0.08
HDAC7-228ENST00000548938 CCNG2Q16589 344 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 KRT39Q6A163 491 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 TATDN1Q6P1N9 297 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 RFWD3Q6PCD5 774 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 OTOAQ7RTW8 1153 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 HAUS6Q7Z4H7 955 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 DNAJC9Q8WXX5 260 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 KIFAP3Q92845 792 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 SMC6Q96SB8 1091 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 MIPEPQ99797 713 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 SH3GL3Q99963 347 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 SYT15Q9BQS2 421 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 FHDC1Q9C0D6 1143 aaPredicted RBP14.54□□□□□ -0.08
HDAC7-228ENST00000548938 UBN1Q9NPG3 1134 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 SERPINA10Q9UK55 444 aa14.54□□□□□ -0.08
HDAC7-228ENST00000548938 TMEM150BA6NC51 233 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 GH2P01242 217 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 POLR2MP0CAP2 368 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 ZSCAN5DPP0CG00 497 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 UNGP13051 313 aaPredicted RBP14.53□□□□□ -0.08
HDAC7-228ENST00000548938 PLS3P13797 630 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 CD58P19256 250 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 SESN3P58005 492 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 NR1H3Q13133 447 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 NLRP9Q7RTR0 991 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 TRMT1LQ7Z2T5 733 aaKnown RBP14.53□□□□□ -0.08
HDAC7-228ENST00000548938 PI4K2AQ9BTU6 479 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 OSBPL8Q9BZF1 889 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 NPHS2Q9NP85 383 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 GPRC5CQ9NQ84 441 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 KLHL11Q9NVR0 708 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 ZFP69BQ9UJL9 534 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 A0A1W2PPM1 405 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 SLC1A1P43005 524 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 MXRA7P84157 204 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 BIRC2Q13490 618 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 ALCAMQ13740 583 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 GNPTABQ3T906 1256 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 CMPK2Q5EBM0 449 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 TMEM174Q8WUU8 243 aa14.53□□□□□ -0.08
HDAC7-228ENST00000548938 SMG5Q9UPR3 1016 aaKnown RBP14.53□□□□□ -0.08
HDAC7-228ENST00000548938 ZNF646O15015 1829 aaPredicted RBP14.52□□□□□ -0.08
HDAC7-228ENST00000548938 LRRD1A4D1F6 860 aa14.52□□□□□ -0.08
HDAC7-228ENST00000548938 TRAFD1O14545 582 aaPredicted RBP14.52□□□□□ -0.08
HDAC7-228ENST00000548938 FESP07332 822 aa14.52□□□□□ -0.08
HDAC7-228ENST00000548938 ACADSP16219 412 aa14.52□□□□□ -0.08
HDAC7-228ENST00000548938 PECAM1P16284 738 aaPredicted RBP14.52□□□□□ -0.08
HDAC7-228ENST00000548938 RASSF2P50749 326 aa14.52□□□□□ -0.08
HDAC7-228ENST00000548938 GPC3P51654 580 aa14.52□□□□□ -0.08
HDAC7-228ENST00000548938 TSNAXIP1Q2TAA8 658 aa14.52□□□□□ -0.08
HDAC7-228ENST00000548938 MUM1Q2TAK8 710 aa14.52□□□□□ -0.08
HDAC7-228ENST00000548938 PLEKHG4Q58EX7 1191 aa14.52□□□□□ -0.08
HDAC7-228ENST00000548938 HHATQ5VTY9 493 aa14.52□□□□□ -0.08
HDAC7-228ENST00000548938 MTDHQ86UE4 582 aaKnown RBP14.52□□□□□ -0.08
HDAC7-228ENST00000548938 RTKN2Q8IZC4 609 aa14.52□□□□□ -0.08
HDAC7-228ENST00000548938 LBHD1Q9BQE6 289 aaPredicted RBP14.52□□□□□ -0.08
HDAC7-228ENST00000548938 IDI2Q9BXS1 227 aa14.52□□□□□ -0.08
HDAC7-228ENST00000548938 VPS37BQ9H9H4 285 aa14.52□□□□□ -0.08
HDAC7-228ENST00000548938 CYLDQ9NQC7 956 aa14.52□□□□□ -0.08
HDAC7-228ENST00000548938 AVENQ9NQS1 362 aaPredicted RBP14.52□□□□□ -0.08
HDAC7-228ENST00000548938 PROSCO94903 275 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 MAPTP10636 758 aaKnown RBP14.52□□□□□ -0.09
HDAC7-228ENST00000548938 PTPN4P29074 926 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 RARRES1P49788 294 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 PEX3P56589 373 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 GTF2BQ00403 316 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 KLC1Q07866 573 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 KHDC1Q4VXA5 237 aaKnown RBP14.52□□□□□ -0.09
HDAC7-228ENST00000548938 TMEM154Q6P9G4 183 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 MIER3Q7Z3K6 550 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 TDRPQ86YL5 185 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 FBXL13Q8NEE6 735 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 TMEM8AQ9HCN3 771 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 ZNF277Q9NRM2 450 aaPredicted RBP14.52□□□□□ -0.09
HDAC7-228ENST00000548938 NMRK1Q9NWW6 199 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 RAB20Q9NX57 234 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 ZBTB21Q9ULJ3 1066 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 COQ4Q9Y3A0 265 aa14.52□□□□□ -0.09
HDAC7-228ENST00000548938 MYPNQ86TC9 1320 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms