RNA–Protein interactions for RNA: ENST00000548539.1

VPS29-205, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-205ENST00000548539 MORC4Q8TE76 937 aa5.14□□□□□ -1.59
VPS29-205ENST00000548539 LENG9Q96B70 501 aa5.14□□□□□ -1.59
VPS29-205ENST00000548539 CYFIP2Q96F07 1278 aa5.14□□□□□ -1.59
VPS29-205ENST00000548539 CEP95Q96GE4 821 aa5.14□□□□□ -1.59
VPS29-205ENST00000548539 STRBPQ96SI9 672 aaKnown RBP5.14□□□□□ -1.59
VPS29-205ENST00000548539 ELAC2Q9BQ52 826 aaKnown RBP5.14□□□□□ -1.59
VPS29-205ENST00000548539 ATP6V0A4Q9HBG4 840 aa5.14□□□□□ -1.59
VPS29-205ENST00000548539 PNPOQ9NVS9 261 aa5.14□□□□□ -1.59
VPS29-205ENST00000548539 FEZ2Q9UHY8 353 aaPredicted RBP5.14□□□□□ -1.59
VPS29-205ENST00000548539 DAAM1Q9Y4D1 1078 aa5.14□□□□□ -1.59
VPS29-205ENST00000548539 PCDHA1Q9Y5I3 950 aa5.14□□□□□ -1.59
VPS29-205ENST00000548539 A0A088AWK7 358 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 NRP1O14786 923 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 MTSS1O43312 755 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 MGEA5O60502 916 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 GASTP01350 101 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 KITP10721 976 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 CDK4P11802 303 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 ZNF37AP17032 561 aaPredicted RBP5.13□□□□□ -1.59
VPS29-205ENST00000548539 APBA1Q02410 837 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 PTPAQ15257 358 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 FLYWCH1Q4VC44 716 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 MFSD14BQ5SR56 506 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 C10orf62Q5T681 223 aaPredicted RBP5.13□□□□□ -1.59
VPS29-205ENST00000548539 AFMIDQ63HM1 303 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 MORC1Q86VD1 984 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 EXOC8Q8IYI6 725 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 CMTM4Q8IZR5 234 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 ZNF276Q8N554 614 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 DCBLD1Q8N8Z6 715 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 FBXO41Q8TF61 875 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 MTFMTQ96DP5 389 aaKnown RBP5.13□□□□□ -1.59
VPS29-205ENST00000548539 BBC3Q96PG8 261 aaPredicted RBP5.13□□□□□ -1.59
VPS29-205ENST00000548539 TBCBQ99426 244 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 MYOCQ99972 504 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 C1orf43Q9BWL3 253 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 GPR87Q9BY21 358 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 C22orf23Q9BZE7 217 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 EPC1Q9H2F5 836 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 SLAMF7Q9NQ25 335 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 CALCOCO1Q9P1Z2 691 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 TAGLN3Q9UI15 199 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 PCDHA6Q9UN73 950 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 CORO2BQ9UQ03 480 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 XDHP47989 1333 aa5.13□□□□□ -1.59
VPS29-205ENST00000548539 A0A1W2PPL8 197 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 UBE2QL1A1L167 161 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 STC2O76061 302 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 AHSGP02765 367 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 CD1AP06126 327 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 IL2RBP14784 551 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 CTXN1P60606 82 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 GPSM2P81274 684 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 FAM214AQ32MH5 1076 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 GAGE13Q4V321 117 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 COLEC12Q5KU26 742 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 LY6G5CQ5SRR4 150 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 PDZD4Q76G19 769 aaPredicted RBP5.12□□□□□ -1.59
VPS29-205ENST00000548539 ZNF572Q7Z3I7 529 aaPredicted RBP5.12□□□□□ -1.59
VPS29-205ENST00000548539 SRLQ86TD4 932 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 PPP1R3BQ86XI6 285 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 TNIP3Q96KP6 325 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 ARPC5LQ9BPX5 153 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 IL23AQ9NPF7 189 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 KLHL11Q9NVR0 708 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 FNIP2Q9P278 1114 aa5.12□□□□□ -1.59
VPS29-205ENST00000548539 PLEKHD1A6NEE1 506 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 NT5C1B-RDH14C9J2C7 533 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 F2RL2O00254 374 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 KPNA5O15131 536 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 PHGDHO43175 533 aaKnown RBP5.11□□□□□ -1.59
VPS29-205ENST00000548539 ARIH2O95376 493 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 SBK3P0C264 359 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 MYF5P13349 255 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 ALOX15P16050 662 aaPredicted RBP5.11□□□□□ -1.59
VPS29-205ENST00000548539 SLC7A1P30825 629 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 PIK3CBP42338 1070 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 PHKA1P46020 1223 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 GZMKP49863 264 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 NPEPPSP55786 919 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 CREMQ03060 361 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 SP140Q13342 867 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 POLD3Q15054 466 aaPredicted RBP5.11□□□□□ -1.59
VPS29-205ENST00000548539 ELAVL1Q15717 326 aaKnown RBP5.11□□□□□ -1.59
VPS29-205ENST00000548539 RABL3Q5HYI8 236 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 KHDC1LQ5JSQ8 128 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 EPHA10Q5JZY3 1008 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 GORABQ5T7V8 394 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 XRRA1Q6P2D8 792 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 RHOUQ7L0Q8 258 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 CERS3Q8IU89 383 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 SPICE1Q8N0Z3 855 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 VPS37AQ8NEZ2 397 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 IL31RAQ8NI17 732 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 SLC35B2Q8TB61 432 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 PROKR1Q8TCW9 393 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 CASKIN2Q8WXE0 1202 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 TNPO1Q92973 898 aaKnown RBP5.11□□□□□ -1.59
VPS29-205ENST00000548539 ARL8AQ96BM9 186 aa5.11□□□□□ -1.59
VPS29-205ENST00000548539 IL17RAQ96F46 866 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms