RNA–Protein interactions for RNA: ENST00000548431.1

CALCOCO1-211, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-211ENST00000548431 CASP14P31944 242 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 KRT9P35527 623 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 LILRA4P59901 499 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 MYL6P60660 151 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 POLR2FP61218 127 aaKnown RBP7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 KCNMA1Q12791 1236 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 TBX2Q13207 712 aaPredicted RBP7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 CUL2Q13617 745 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 RAPGEF1Q13905 1077 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 BTG3Q14201 252 aaPredicted RBP7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 BMS1Q14692 1282 aaKnown RBP7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 ARID5BQ14865 1188 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 NAB2Q15742 525 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 TMEM240Q5SV17 173 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 SFMBT2Q5VUG0 894 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 PPP1R2P3Q6NXS1 205 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 UNC93AQ86WB7 457 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 TXLNBQ8N3L3 684 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 C18orf25Q96B23 403 aaPredicted RBP7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 ZNF689Q96CS4 500 aaPredicted RBP7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 CASD1Q96PB1 797 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 DNAJC7Q99615 494 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 RAD9AQ99638 391 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 TTYH3Q9C0H2 523 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 XYLT2Q9H1B5 865 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 SIX4Q9UIU6 781 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 DNAJC12Q9UKB3 198 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 KIAA1257Q9ULG3 409 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 ZMYND8Q9ULU4 1186 aaPredicted RBP7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 PLAGL2Q9UPG8 496 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 PCDHB12Q9Y5F1 795 aa7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 SF3B1O75533 1304 aaKnown RBP eCLIP7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 COL4A4P53420 1690 aaPredicted RBP7.66□□□□□ -1.18
CALCOCO1-211ENST00000548431 CASTOR2A6NHX0 329 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 MEIS3P2A8K0S8 358 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 F8VZ95 297 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 SYN3O14994 580 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 MED7O43513 233 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 TACC1O75410 805 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 GFPT2O94808 682 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 CST3P01034 146 aaPredicted RBP7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 PAEPP09466 180 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 TYMPP19971 482 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 HNRNPH3P31942 346 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 SOX5P35711 763 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 ASPAP45381 313 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 LHX1P48742 406 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 AARSP49588 968 aaKnown RBP eCLIP7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 RGS19P49795 217 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 PDE6CP51160 858 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 CLCNKBP51801 687 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 WNT7BP56706 349 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 JAM2P57087 298 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 HTRA4P83105 476 aaPredicted RBP7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 CDK17Q00537 523 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 CREMQ03060 361 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 PTK2Q05397 1052 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 SOX4Q06945 474 aaPredicted RBP7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 INCA1Q0VD86 236 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 STILQ15468 1287 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 ASIC2Q16515 512 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 HS1BP3Q53T59 392 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 SPOUT1Q5T280 376 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 RASIP1Q5U651 963 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 IQCEQ6IPM2 695 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 PHLDB3Q6NSJ2 640 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 DSTYKQ6XUX3 929 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 C16orf59Q7L2K0 433 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 RRAGAQ7L523 313 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 ZNF677Q86XU0 584 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 HERC6Q8IVU3 1022 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 COLGALT2Q8IYK4 626 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 FIBCD1Q8N539 461 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 SPC24Q8NBT2 197 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 CXorf38Q8TB03 319 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 CPLX3Q8WVH0 158 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 SHC3Q92529 594 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 SEMA4DQ92854 862 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 VWCEQ96DN2 955 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 TRIM44Q96DX7 344 aaPredicted RBP7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 TNIP3Q96KP6 325 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 RNPC3Q96LT9 517 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 ZNF558Q96NG5 402 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 SAMD11Q96NU1 681 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 MMS19Q96T76 1030 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 BCO2Q9BYV7 579 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 UBE2OQ9C0C9 1292 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 GANQ9H2C0 597 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 RC3H2Q9HBD1 1191 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 SIX2Q9NPC8 291 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 LUC7LQ9NQ29 371 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 ABHD10Q9NUJ1 306 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 RNF19AQ9NV58 838 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 AIPL1Q9NZN9 384 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 NXF1Q9UBU9 619 aaKnown RBP7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 ADAM28Q9UKQ2 775 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 SSX2IPQ9Y2D8 614 aa7.65□□□□□ -1.18
CALCOCO1-211ENST00000548431 FAN1Q9Y2M0 1017 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms