RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 THAP12O43422 761 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 RPS6KA5O75582 802 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 ITGB3P05106 788 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 ZSCAN20P17040 1043 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-215ENST00000547672 CYP3A5P20815 502 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 ABCB4P21439 1286 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 PAX3P23760 479 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 POLR2BP30876 1174 aaKnown RBP14.35□□□□□ -0.11
PTCH1-215ENST00000547672 ZNF132P52740 706 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 SNX16P57768 344 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 TMEM62Q0P6H9 643 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 PPP2R5EQ16537 467 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 WDR72Q3MJ13 1102 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 SPOPLQ6IQ16 392 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 C11orf63Q6NUN7 778 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 RSRC2Q7L4I2 434 aaKnown RBP14.35□□□□□ -0.11
PTCH1-215ENST00000547672 ZNF572Q7Z3I7 529 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-215ENST00000547672 CDR2LQ86X02 465 aaPredicted RBP14.35□□□□□ -0.11
PTCH1-215ENST00000547672 UBL4BQ8N7F7 174 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 CEP120Q8N960 986 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 C1orf127Q8N9H9 656 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 TMEM35BQ8NCS4 154 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 CD99L2Q8TCZ2 262 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 GLT1D1Q96MS3 346 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 BCO2Q9BYV7 579 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 XYLT2Q9H1B5 865 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 SLC38A7Q9NVC3 462 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 SALL4Q9UJQ4 1053 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 AGAP1Q9UPQ3 857 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 NOD1Q9Y239 953 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 SCINQ9Y6U3 715 aa14.35□□□□□ -0.11
PTCH1-215ENST00000547672 CYP1A1P04798 512 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-215ENST00000547672 CALB1P05937 261 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 NFICP08651 508 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 UNGP13051 313 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-215ENST00000547672 KCNE1P15382 129 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 RAB27AP51159 221 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 TAP1Q03518 808 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
PTCH1-215ENST00000547672 PTGISQ16647 500 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 ALKAL1Q6UXT8 129 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 PHF13Q86YI8 300 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-215ENST00000547672 UBR7Q8N806 425 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 LRRC57Q8N9N7 239 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 ZNF606Q8WXB4 792 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 ANKRD7Q92527 254 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 RUBCNQ92622 972 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 SNX27Q96L92 541 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 ZNF560Q96MR9 790 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 BEGAINQ9BUH8 593 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 TLR10Q9BXR5 811 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 THAP2Q9H0W7 228 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 LHX5Q9H2C1 402 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 CDHR5Q9HBB8 845 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 UBN1Q9NPG3 1134 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 SNTG2Q9NY99 539 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 CNTN3Q9P232 1028 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 NXF1Q9UBU9 619 aaKnown RBP14.34□□□□□ -0.11
PTCH1-215ENST00000547672 PUF60Q9UHX1 559 aaKnown RBP14.34□□□□□ -0.11
PTCH1-215ENST00000547672 PCDHGC3Q9UN70 934 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 CDY2AQ9Y6F7 541 aa14.34□□□□□ -0.11
PTCH1-215ENST00000547672 MYH10P35580 1976 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 KIF4AO95239 1232 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 ELNP15502 786 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 CCND3P30281 292 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-215ENST00000547672 SLC1A1P43005 524 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 VEGFBP49765 207 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 ZNF200P98182 395 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-215ENST00000547672 CENPCQ03188 943 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 ITGA7Q13683 1181 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 ZBTB6Q15916 424 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 ERCC6LQ2NKX8 1250 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 GLE1Q53GS7 698 aaKnown RBP14.33□□□□□ -0.12
PTCH1-215ENST00000547672 XKR4Q5GH76 650 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 TWF2Q6IBS0 349 aaKnown RBP14.33□□□□□ -0.12
PTCH1-215ENST00000547672 CCSAPQ6IQ19 270 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-215ENST00000547672 GDF6Q6KF10 455 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-215ENST00000547672 TMEM192Q8IY95 271 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 MCOLN2Q8IZK6 566 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 ZNF653Q96CK0 615 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 PCDHB18PQ96TA0 734 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 WNT8AQ9H1J5 351 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 PARP2Q9UGN5 583 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 SIX4Q9UIU6 781 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 STRIP2Q9ULQ0 834 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 SCN10AQ9Y5Y9 1956 aa14.33□□□□□ -0.12
PTCH1-215ENST00000547672 MYADML2A6NDP7 307 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 ERLIN1O75477 346 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-215ENST00000547672 VDRP11473 427 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 FGFR4P22455 802 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 GRK4P32298 578 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 ASPAP45381 313 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 ACLYP53396 1101 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 FAM26DQ5JW98 314 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 TEX35Q5T0J7 233 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 CREG2Q8IUH2 290 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 OLIG1Q8TAK6 271 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 PGBD4Q96DM1 585 aa14.32□□□□□ -0.12
PTCH1-215ENST00000547672 ARID3AQ99856 593 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms