RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 GRIN3BO60391 1043 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 LDHBP07195 334 aaKnown RBP11.32□□□□□ -0.6
NPAS3-205ENST00000547068 SPATA31D3P0C874 917 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 RSPH10BP0C881 870 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 FGFR1P11362 822 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 RRM1P23921 792 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 CCNFP41002 786 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 USP46P62068 366 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 OVGP1Q12889 678 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 MAP7Q14244 749 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 CFAP157Q5JU67 520 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 STRIP1Q5VSL9 837 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 LVRNQ6Q4G3 990 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 RINLQ6ZS11 566 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 SPATA31D4Q6ZUB0 917 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 RFX8Q6ZV50 586 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 SMC1BQ8NDV3 1235 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 ZNF564Q8TBZ8 553 aaPredicted RBP11.32□□□□□ -0.6
NPAS3-205ENST00000547068 ZNF287Q9HBT7 754 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 TAS2R1Q9NYW7 299 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 ZNRF3Q9ULT6 936 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 DNM3Q9UQ16 869 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 PFDN1O60925 122 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 MTA2O94776 668 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 FAM163BP0C2L3 166 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 BCRP11274 1271 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 ESRRAP11474 423 aaPredicted RBP11.32□□□□□ -0.6
NPAS3-205ENST00000547068 MAGEA4P43358 317 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 CCDC62Q6P9F0 684 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 CATSPER3Q86XQ3 398 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 ARHGAP24Q8N264 748 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 SYT2Q8N9I0 419 aaPredicted RBP11.32□□□□□ -0.6
NPAS3-205ENST00000547068 RFWD2Q8NHY2 731 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 CFAP57Q96MR6 1250 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 FNBP1Q96RU3 617 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 ECSITQ9BQ95 431 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 RUSC1Q9BVN2 902 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 NUP85Q9BW27 656 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 IKZF4Q9H2S9 585 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 ETNK2Q9NVF9 386 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 SENP1Q9P0U3 644 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 SAP30BPQ9UHR5 308 aaKnown RBP11.32□□□□□ -0.6
NPAS3-205ENST00000547068 PCDHGA4Q9Y5G9 962 aa11.32□□□□□ -0.6
NPAS3-205ENST00000547068 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.32□□□□□ -0.6
NPAS3-205ENST00000547068 TGFB1I1O43294 461 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 TBCAO75347 108 aaKnown RBP11.31□□□□□ -0.6
NPAS3-205ENST00000547068 ABHD2P08910 425 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 TRIM49P0CI25 452 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 TRIM49CP0CI26 452 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 YBX3P16989 372 aaKnown RBP eCLIP11.31□□□□□ -0.6
NPAS3-205ENST00000547068 DESP17661 470 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 AMPD1P23109 780 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 GCAP28676 217 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 PGM1P36871 562 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 INHBCP55103 352 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 MYL7Q01449 175 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 ZBTB16Q05516 673 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 DBN1Q16643 649 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 SH2D4BQ5SQS7 431 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 RELL1Q8IUW5 271 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 NME8Q8N427 588 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 BBOF1Q8ND07 529 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 TGFBRAP1Q8WUH2 860 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 NAT14Q8WUY8 206 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 TTC25Q96NG3 672 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 RBM15Q96T37 977 aaKnown RBP eCLIP11.31□□□□□ -0.6
NPAS3-205ENST00000547068 KANSL3Q9P2N6 904 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 BLOC1S6Q9UL45 172 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 SUGT1Q9Y2Z0 365 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 GMEB1Q9Y692 573 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 MYO3BQ8WXR4 1341 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 WDR91A4D1P6 747 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 HNRNPRO43390 633 aaKnown RBP11.31□□□□□ -0.6
NPAS3-205ENST00000547068 SLC26A4O43511 780 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 ANPEPP15144 967 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 DEUP1Q05D60 604 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 MAPK6Q16659 721 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 IZUMO3Q5VZ72 239 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 SPATA24Q86W54 205 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 SLF2Q8IX21 1173 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 PSPC1Q8WXF1 523 aaKnown RBP11.31□□□□□ -0.6
NPAS3-205ENST00000547068 CEP95Q96GE4 821 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 FAM161BQ96MY7 647 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 BCAS3Q9H6U6 928 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 RHBDL2Q9NX52 303 aa11.31□□□□□ -0.6
NPAS3-205ENST00000547068 DCAF8L1A6NGE4 600 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 TYROBPO43914 113 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 OPHN1O60890 802 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 PABPC4LP0CB38 370 aaKnown RBP11.3□□□□□ -0.6
NPAS3-205ENST00000547068 SERPINB3P29508 390 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 PIK3CAP42336 1068 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 CDK8P49336 464 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 CLK2P49760 499 aaKnown RBP11.3□□□□□ -0.6
NPAS3-205ENST00000547068 EIF6P56537 245 aaKnown RBP11.3□□□□□ -0.6
NPAS3-205ENST00000547068 FKBP1AP62942 108 aaKnown RBP11.3□□□□□ -0.6
NPAS3-205ENST00000547068 GSTO1P78417 241 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 SEPT7Q16181 437 aaKnown RBP11.3□□□□□ -0.6
NPAS3-205ENST00000547068 NEDD1Q8NHV4 660 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 PPP2R3CQ969Q6 453 aa11.3□□□□□ -0.6
NPAS3-205ENST00000547068 MRRFQ96E11 262 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms