RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CCPG1Q9ULG6 757 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 IKBKGQ9Y6K9 419 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 ZMYM2Q9UBW7 1377 aa15.52■□□□□ 0.07
HOXC11-202ENST00000546378 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.51■□□□□ 0.07
HOXC11-202ENST00000546378 ARHGAP42A6NI28 874 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 TLR3O15455 904 aaKnown RBP15.51■□□□□ 0.07
HOXC11-202ENST00000546378 ENO1P06733 434 aaKnown RBP15.51■□□□□ 0.07
HOXC11-202ENST00000546378 ABL2P42684 1182 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 FMO1Q01740 532 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 NBPF12Q5TAG4 269 aaPredicted RBP15.51■□□□□ 0.07
HOXC11-202ENST00000546378 ANGEL2Q5VTE6 544 aaKnown RBP15.51■□□□□ 0.07
HOXC11-202ENST00000546378 CFAP36Q96G28 342 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 FAM161BQ96MY7 647 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 CALN1Q9BXU9 219 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.51■□□□□ 0.07
HOXC11-202ENST00000546378 HACL1Q9UJ83 578 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 CHMP2BQ9UQN3 213 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 MEI4A8MW99 385 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 DDNO94850 711 aaPredicted RBP15.51■□□□□ 0.07
HOXC11-202ENST00000546378 PECAM1P16284 738 aaPredicted RBP15.51■□□□□ 0.07
HOXC11-202ENST00000546378 CEP55Q53EZ4 464 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 DSTYKQ6XUX3 929 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 TEKT3Q9BXF9 490 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 ZNF341Q9BYN7 854 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 DEFB129Q9H1M3 183 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 MRPL42Q9Y6G3 142 aaKnown RBP15.51■□□□□ 0.07
HOXC11-202ENST00000546378 PITPNM2Q9BZ72 1349 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 ZNF541Q9H0D2 1346 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 PDE4DIPQ5VU43 2346 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 C5orf60A6NFR6 353 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 GYG2O15488 501 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 PEX10O60683 326 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 GRAP2O75791 330 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 USP1O94782 785 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 KRT19P08727 400 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 GM2AP17900 193 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 CLK2P49760 499 aaKnown RBP15.51■□□□□ 0.07
HOXC11-202ENST00000546378 MFAP3P55082 362 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 TFDP1Q14186 410 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 TXNRD3NBQ6F5E7 133 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 MIS18BP1Q6P0N0 1132 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 PALM2Q8IXS6 379 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 RFWD2Q8NHY2 731 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 TRIM56Q9BRZ2 755 aaKnown RBP15.51■□□□□ 0.07
HOXC11-202ENST00000546378 IQCGQ9H095 443 aaKnown RBP15.51■□□□□ 0.07
HOXC11-202ENST00000546378 NXF1Q9UBU9 619 aaKnown RBP15.51■□□□□ 0.07
HOXC11-202ENST00000546378 CHKBQ9Y259 395 aa15.51■□□□□ 0.07
HOXC11-202ENST00000546378 ADAMTSL1Q8N6G6 1762 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 FAM47DPA6NHR8 397 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 LRRIQ4A6NIV6 560 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 HIRAP54198 1017 aaPredicted RBP15.5■□□□□ 0.07
HOXC11-202ENST00000546378 EPHB1P54762 984 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 UGCGQ16739 394 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 MTERF2Q49AM1 385 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 RASIP1Q5U651 963 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 AP1ARQ63HQ0 302 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 C11orf63Q6NUN7 778 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 ANKS1BQ7Z6G8 1248 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 LMNTD2Q8IXW0 634 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 FAM13CQ8NE31 585 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 ZBTB45Q96K62 511 aaPredicted RBP15.5■□□□□ 0.07
HOXC11-202ENST00000546378 MECRQ9BV79 373 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 HEY2Q9UBP5 337 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 VAV3Q9UKW4 847 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.5■□□□□ 0.07
HOXC11-202ENST00000546378 IGKV6D-41A0A0C4DH26 115 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 A0A1B0GVG6 124 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 CAPN9O14815 690 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 CLGNO14967 610 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 TAC1P20366 129 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 PTDSS1P48651 473 aaKnown RBP15.5■□□□□ 0.07
HOXC11-202ENST00000546378 CDR2Q01850 454 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 KPNB1Q14974 876 aaKnown RBP15.5■□□□□ 0.07
HOXC11-202ENST00000546378 CGB2Q6NT52 195 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 DPY19L2P1Q6NXN4 242 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 EMC1Q8N766 993 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 HSPH1Q92598 858 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 CEP170P1Q96L14 293 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 OSBPL8Q9BZF1 889 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 RNF19AQ9NV58 838 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 RNF181Q9P0P0 153 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 SLC17A7Q9P2U7 560 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 GTF3C4Q9UKN8 822 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 ZHX2Q9Y6X8 837 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 TIAM2Q8IVF5 1701 aa15.5■□□□□ 0.07
HOXC11-202ENST00000546378 MIF4GDA9UHW6 222 aaKnown RBP15.49■□□□□ 0.07
HOXC11-202ENST00000546378 AVILO75366 819 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 FAM155BO75949 473 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 NUDT17P0C025 328 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 ITIH4Q14624 930 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 LACTB2Q53H82 288 aaPredicted RBP15.49■□□□□ 0.07
HOXC11-202ENST00000546378 TATDN1Q6P1N9 297 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 ZCCHC23Q6ZST2 131 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 ATXN7L3BQ96GX2 97 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 MCEEQ96PE7 176 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 C1orf112Q9NSG2 853 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.49■□□□□ 0.07
HOXC11-202ENST00000546378 COL4A5P29400 1685 aa15.49■□□□□ 0.07
HOXC11-202ENST00000546378 KIF1CO43896 1103 aaKnown RBP15.49■□□□□ 0.07
HOXC11-202ENST00000546378 CCND1P24385 295 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms