RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 RWDD1Q9H446 243 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-205ENST00000546345 ANGPTL2Q9UKU9 493 aa7.56□□□□□ -1.2
CCDC60-205ENST00000546345 LAMA1P25391 3075 aa7.56□□□□□ -1.2
CCDC60-205ENST00000546345 IGSF10Q6WRI0 2623 aa7.56□□□□□ -1.2
CCDC60-205ENST00000546345 NUP205Q92621 2012 aa7.56□□□□□ -1.2
CCDC60-205ENST00000546345 C9IYK1 514 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 RANBP6O60518 1105 aaKnown RBP7.55□□□□□ -1.2
CCDC60-205ENST00000546345 KIF20AO95235 890 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 PGRP06401 933 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 HSPD1P10809 573 aaKnown RBP7.55□□□□□ -1.2
CCDC60-205ENST00000546345 IBSPP21815 317 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-205ENST00000546345 MRPS9P82933 396 aaKnown RBP7.55□□□□□ -1.2
CCDC60-205ENST00000546345 TMEM62Q0P6H9 643 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 PPFIA1Q13136 1202 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 ZNF528Q3MIS6 628 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 SPOUT1Q5T280 376 aaKnown RBP7.55□□□□□ -1.2
CCDC60-205ENST00000546345 TMC5Q6UXY8 1006 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 CCDC149Q6ZUS6 474 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 STOX1Q6ZVD7 989 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 UBE3DQ7Z6J8 389 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 TMEM173Q86WV6 379 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-205ENST00000546345 HSCBQ8IWL3 235 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 MRPL43Q8N983 215 aaKnown RBP7.55□□□□□ -1.2
CCDC60-205ENST00000546345 FBXO27Q8NI29 283 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 SLC22A17Q8WUG5 538 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 TMEM40Q8WWA1 233 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 AUTS2Q8WXX7 1259 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 INPP4AQ96PE3 977 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-205ENST00000546345 PSMG3-AS1Q96PY0 264 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 MLXIPQ9HAP2 919 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 NGRNQ9NPE2 291 aaKnown RBP7.55□□□□□ -1.2
CCDC60-205ENST00000546345 ARHGEF3Q9NR81 526 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 ANAPC4Q9UJX5 808 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 ZNF215Q9UL58 517 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-205ENST00000546345 RNF112Q9ULX5 631 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 USP18Q9UMW8 372 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 PCDHGB7Q9Y5F8 929 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 TRPV2Q9Y5S1 764 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 SQORQ9Y6N5 450 aa7.55□□□□□ -1.2
CCDC60-205ENST00000546345 KIF26AQ9ULI4 1882 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-205ENST00000546345 KDM3AQ9Y4C1 1321 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 FAM170BA6NMN3 283 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 NOP56O00567 594 aaKnown RBP7.54□□□□□ -1.2
CCDC60-205ENST00000546345 CFBP00751 764 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 PROS1P07225 676 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 C1QTNF9P0C862 333 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 TGFB3P10600 412 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 SRFP11831 508 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 HOXA13P31271 388 aaPredicted RBP7.54□□□□□ -1.2
CCDC60-205ENST00000546345 HMGN5P82970 282 aaKnown RBP7.54□□□□□ -1.2
CCDC60-205ENST00000546345 PAK2Q13177 524 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 SMC1AQ14683 1233 aaKnown RBP7.54□□□□□ -1.2
CCDC60-205ENST00000546345 WTAPQ15007 396 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 CPSF6Q16630 551 aaKnown RBP eCLIP7.54□□□□□ -1.2
CCDC60-205ENST00000546345 CYP27C1Q4G0S4 372 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 VPS53Q5VIR6 699 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 KCNV1Q6PIU1 500 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 KCNT2Q6UVM3 1135 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 REC114Q7Z4M0 266 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 GPR149Q86SP6 731 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 NT5DC4Q86YG4 428 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 SMC5Q8IY18 1101 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 ADGRF4Q8IZF3 695 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 ZNF654Q8IZM8 581 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 SLC39A11Q8N1S5 342 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 NETO1Q8TDF5 533 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 NT5C1AQ9BXI3 368 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 FAM49AQ9H0Q0 323 aaPredicted RBP7.54□□□□□ -1.2
CCDC60-205ENST00000546345 ZBP1Q9H171 429 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 FBRSQ9HAH7 460 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 IGSF9Q9P2J2 1179 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 SIT1Q9Y3P8 196 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 PCDHGA2Q9Y5H1 932 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 KIAA1549LQ6ZVL6 1849 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 VWA8A3KMH1 1905 aa7.54□□□□□ -1.2
CCDC60-205ENST00000546345 FREM2Q5SZK8 3169 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.53□□□□□ -1.2
CCDC60-205ENST00000546345 PRR19A6NJB7 356 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 CYSRT1A8MQ03 144 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 SMARCA5O60264 1052 aaPredicted RBP7.53□□□□□ -1.2
CCDC60-205ENST00000546345 LRIG2O94898 1065 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 SLC3A2P08195 630 aaKnown RBP7.53□□□□□ -1.2
CCDC60-205ENST00000546345 FAM87AP0C7U9 286 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 TDGF1P13385 188 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 PLCG1P19174 1290 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 MARK3P27448 753 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 RACK1P63244 317 aaKnown RBP7.53□□□□□ -1.2
CCDC60-205ENST00000546345 FAM193AP78312 1265 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 SP4Q02446 784 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 SLBPQ14493 270 aaKnown RBP eCLIP7.53□□□□□ -1.2
CCDC60-205ENST00000546345 SLC35G1Q2M3R5 365 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 ATAT1Q5SQI0 421 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 ZMYM1Q5SVZ6 1142 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 GPATCH4Q5T3I0 446 aaKnown RBP7.53□□□□□ -1.2
CCDC60-205ENST00000546345 N4BP2L1Q5TBK1 243 aaPredicted RBP7.53□□□□□ -1.2
CCDC60-205ENST00000546345 ZNF765Q7L2R6 523 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 OTOP3Q7RTS5 596 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 MCF2L2Q86YR7 1114 aa7.53□□□□□ -1.2
CCDC60-205ENST00000546345 BCL7CQ8WUZ0 217 aaPredicted RBP7.53□□□□□ -1.2
CCDC60-205ENST00000546345 TRAPPC12Q8WVT3 735 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms