RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 ZHX3Q9H4I2 956 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 TRPV5Q9NQA5 729 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 TIMM22Q9Y584 194 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 ZNFX1Q9P2E3 1918 aaKnown RBP8.34□□□□□ -1.08
UBR1-202ENST00000546274 SCN9AQ15858 1988 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 KLRG2A4D1S0 409 aaPredicted RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 C6orf229H3BNL8 230 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 O00370 1275 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 RIMBP2O15034 1052 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 TGFB1I1O43294 461 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 GH1P01241 217 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 LMNAP02545 664 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 NR3C1P04150 777 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 KRT18P05783 430 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 XRCC5P13010 732 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 TAL1P17542 331 aaPredicted RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 SCNN1DP51172 638 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 EIF3BP55884 814 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 POU5F1Q01860 360 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 KIF22Q14807 665 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 DCAF17Q5H9S7 520 aaPredicted RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 UBAP2Q5T6F2 1119 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 TTC30AQ86WT1 665 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 LRRC37BQ96QE4 947 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 TGS1Q96RS0 853 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 CYTH2Q99418 400 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 SYT11Q9BT88 431 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 GPR88Q9GZN0 384 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 ATAD3AQ9NVI7 634 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 FRMD4BQ9Y2L6 1034 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 A0A0A6YYK5 440 aaPredicted RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 A0A1W2PQ67 120 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 PGRMC1O00264 195 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 KRIT1O00522 736 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 SLC16A3O15427 465 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 RNASEH1O60930 286 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 ZBTB7AO95365 584 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 BAG2O95816 211 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 EEF2P13639 858 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 MARK3P27448 753 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 SNAP25P60880 206 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 AP3B2Q13367 1082 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 LRRC36Q1X8D7 754 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 DCAF12L1Q5VU92 463 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 ADAT2Q7Z6V5 191 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 SGIP1Q9BQI5 828 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 TYW1Q9NV66 732 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 DNAJC17Q9NVM6 304 aaKnown RBP8.33□□□□□ -1.08
UBR1-202ENST00000546274 SELENONQ9NZV5 590 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 GCNT4Q9P109 453 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 ZNF148Q9UQR1 794 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 LOXHD1Q8IVV2 1947 aa8.33□□□□□ -1.08
UBR1-202ENST00000546274 TMEM120BA0PK00 339 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 FAM170AA1A519 330 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 TTLL13PA6NNM8 815 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 TBX3O15119 743 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 MSH4O15457 936 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 DNAJC6O75061 913 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 SKIV2L2P42285 1042 aaKnown RBP8.32□□□□□ -1.08
UBR1-202ENST00000546274 PTGER2P43116 358 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 PLTPP55058 493 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 NSUN2Q08J23 767 aaKnown RBP eCLIP8.32□□□□□ -1.08
UBR1-202ENST00000546274 ZNF394Q53GI3 561 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 ACSBG2Q5FVE4 666 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 CCDC174Q6PII3 467 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 ANO5Q75V66 913 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 PEX5LQ8IYB4 626 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.32□□□□□ -1.08
UBR1-202ENST00000546274 CYP2W1Q8TAV3 490 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 GAB3Q8WWW8 586 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 CRAMP1Q96RY5 1269 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 EIF2AQ9BY44 585 aaKnown RBP8.32□□□□□ -1.08
UBR1-202ENST00000546274 OSGEPQ9NPF4 335 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 KRT82Q9NSB4 513 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 MRGBPQ9NV56 204 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 NR2E1Q9Y466 385 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 TRIM17Q9Y577 477 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 PCDHAC2Q9Y5I4 1007 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 IGSF9BQ9UPX0 1349 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 EML1O00423 815 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 CALUO43852 315 aaPredicted RBP8.32□□□□□ -1.08
UBR1-202ENST00000546274 ANXA13P27216 316 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 SREBF1P36956 1147 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 GRIA2P42262 883 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 CYP4A11Q02928 519 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 BTKQ06187 659 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 RBM44Q6ZP01 1051 aaKnown RBP8.32□□□□□ -1.08
UBR1-202ENST00000546274 RAVER1Q8IY67 606 aaKnown RBP8.32□□□□□ -1.08
UBR1-202ENST00000546274 SCYL3Q8IZE3 742 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 LRRC43Q8N309 656 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 NAP1L3Q99457 506 aaPredicted RBP8.32□□□□□ -1.08
UBR1-202ENST00000546274 NUP85Q9BW27 656 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 COA1Q9GZY4 146 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 GLT8D2Q9H1C3 349 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 HESX1Q9UBX0 185 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 DNM3Q9UQ16 869 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 UTP11Q9Y3A2 253 aaKnown RBP8.32□□□□□ -1.08
UBR1-202ENST00000546274 GTPBP10A4D1E9 387 aaKnown RBP8.32□□□□□ -1.08
UBR1-202ENST00000546274 DCAF8L1A6NGE4 600 aa8.32□□□□□ -1.08
UBR1-202ENST00000546274 FBP2O00757 339 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms