RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 ZNF334Q9HCZ1 680 aaPredicted RBP13.71□□□□□ -0.21
COPS7A-221ENST00000546229 ZSCAN32Q9NX65 697 aa13.71□□□□□ -0.21
COPS7A-221ENST00000546229 ANKFY1Q9P2R3 1169 aa13.71□□□□□ -0.21
COPS7A-221ENST00000546229 MAFFQ9ULX9 164 aa13.71□□□□□ -0.21
COPS7A-221ENST00000546229 SMG5Q9UPR3 1016 aaKnown RBP13.71□□□□□ -0.21
COPS7A-221ENST00000546229 OBSL1O75147 1896 aa13.71□□□□□ -0.21
COPS7A-221ENST00000546229 SPTBN2O15020 2390 aa13.71□□□□□ -0.22
COPS7A-221ENST00000546229 NPHP3-ACAD11A0A0J9YXS1 232 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 OR4Q2P0C623 313 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 HARSP12081 509 aaKnown RBP13.7□□□□□ -0.22
COPS7A-221ENST00000546229 GJA1P17302 382 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 VIPR2P41587 438 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 GUCY2FP51841 1108 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 ZNF131P52739 623 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 ARPP19P56211 112 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 RAD51AP2Q09MP3 1159 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 ENOX2Q16206 610 aaKnown RBP13.7□□□□□ -0.22
COPS7A-221ENST00000546229 ZNF852Q6ZMS4 543 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 PDZD4Q76G19 769 aaPredicted RBP13.7□□□□□ -0.22
COPS7A-221ENST00000546229 TTC9BQ8N6N2 239 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 LRRC3BQ96PB8 259 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 NELL2Q99435 816 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 RAB34Q9BZG1 259 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 PARD6AQ9NPB6 346 aa13.7□□□□□ -0.22
COPS7A-221ENST00000546229 SCN1AP35498 2009 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 LAMA1P25391 3075 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 DENND4CQ5VZ89 1909 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 CD2BP2O95400 341 aaKnown RBP13.69□□□□□ -0.22
COPS7A-221ENST00000546229 CYP3A5P20815 502 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 MCM4P33991 863 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 CACNB1Q02641 598 aaPredicted RBP13.69□□□□□ -0.22
COPS7A-221ENST00000546229 SPAG1Q07617 926 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 FCHO2Q0JRZ9 810 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 PUM1Q14671 1186 aaKnown RBP eCLIP13.69□□□□□ -0.22
COPS7A-221ENST00000546229 TEAD2Q15562 447 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 STXBP5Q5T5C0 1151 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 ERICH6BQ5W0A0 696 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 DTHD1Q6ZMT9 781 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 KCTD17Q8N5Z5 321 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 FAM184AQ8NB25 1140 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 TRMT61BQ9BVS5 477 aaKnown RBP13.69□□□□□ -0.22
COPS7A-221ENST00000546229 PLEKHA5Q9HAU0 1116 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 ZFP14Q9HCL3 533 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 KCND2Q9NZV8 630 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 NUB1Q9Y5A7 615 aa13.69□□□□□ -0.22
COPS7A-221ENST00000546229 MTMR11A4FU01 709 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 ZNF197O14709 1029 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 CLTAP09496 248 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 PLA2G4BP0C869 781 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 CHRNB1P11230 501 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 PSMC3P17980 439 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 ELF1P32519 619 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 GNL2Q13823 731 aaKnown RBP13.68□□□□□ -0.22
COPS7A-221ENST00000546229 GAREM2Q75VX8 874 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 DGLUCYQ7Z3D6 616 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 MFSD6LQ8IWD5 586 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 LEMD2Q8NC56 503 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 APPL2Q8NEU8 664 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 ZSCAN18Q8TBC5 510 aaPredicted RBP13.68□□□□□ -0.22
COPS7A-221ENST00000546229 DEPDC1BQ8WUY9 529 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 TMEM209Q96SK2 561 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 REEP2Q9BRK0 252 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 TCHPQ9BT92 498 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 IER2Q9BTL4 223 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 BRD9Q9H8M2 597 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 BLOC1S4Q9NUP1 217 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 TIMM13Q9Y5L4 95 aaPredicted RBP13.68□□□□□ -0.22
COPS7A-221ENST00000546229 PIAS3Q9Y6X2 628 aa13.68□□□□□ -0.22
COPS7A-221ENST00000546229 LACTBL1A8MY62 500 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 CLDN3O15551 220 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 EIF5BO60841 1220 aaKnown RBP13.67□□□□□ -0.22
COPS7A-221ENST00000546229 PAPSS2O95340 614 aaPredicted RBP13.67□□□□□ -0.22
COPS7A-221ENST00000546229 CPB1P15086 417 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 GDI1P31150 447 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 MLLT6P55198 1093 aaPredicted RBP13.67□□□□□ -0.22
COPS7A-221ENST00000546229 YWHAHQ04917 246 aaPredicted RBP13.67□□□□□ -0.22
COPS7A-221ENST00000546229 GPR17Q13304 367 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 RSPO4Q2I0M5 234 aaPredicted RBP13.67□□□□□ -0.22
COPS7A-221ENST00000546229 RILPL1Q5EBL4 403 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 CENPPQ6IPU0 288 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 TXNDC11Q6PKC3 985 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 OR10T2Q8NGX3 314 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 IRF7Q92985 503 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 FAM126AQ9BYI3 521 aaPredicted RBP13.67□□□□□ -0.22
COPS7A-221ENST00000546229 ASAH2Q9NR71 780 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 C2orf42Q9NWW7 574 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 ODF2LQ9ULJ1 636 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 UBQLN1Q9UMX0 589 aaKnown RBP13.67□□□□□ -0.22
COPS7A-221ENST00000546229 NDRG2Q9UN36 371 aaKnown RBP13.67□□□□□ -0.22
COPS7A-221ENST00000546229 MRPS17Q9Y2R5 130 aaKnown RBP13.67□□□□□ -0.22
COPS7A-221ENST00000546229 ACACBO00763 2458 aa13.67□□□□□ -0.22
COPS7A-221ENST00000546229 A0A0B4J269 797 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 ANO9A1A5B4 782 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 VWA3AA6NCI4 1184 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 HEPACAM2A8MVW5 462 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 K7ESF4 209 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 MAN2B1O00754 1011 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 CYP11A1P05108 521 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 MYL4P12829 197 aa13.66□□□□□ -0.22
COPS7A-221ENST00000546229 TYMPP19971 482 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms