RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 IRF2BP1Q8IU81 584 aa22.4■■□□□ 1.18
SCARB1-211ENST00000546215 DNAJC25Q9H1X3 360 aa22.4■■□□□ 1.18
SCARB1-211ENST00000546215 NSUN3Q9H649 340 aaKnown RBP22.4■■□□□ 1.18
SCARB1-211ENST00000546215 MRPL17Q9NRX2 175 aaKnown RBP22.4■■□□□ 1.18
SCARB1-211ENST00000546215 C2CD2LO14523 706 aa22.39■■□□□ 1.18
SCARB1-211ENST00000546215 SYN3O14994 580 aa22.39■■□□□ 1.18
SCARB1-211ENST00000546215 URODP06132 367 aa22.39■■□□□ 1.18
SCARB1-211ENST00000546215 TKTP29401 623 aaKnown RBP22.39■■□□□ 1.18
SCARB1-211ENST00000546215 GCLMP48507 274 aa22.39■■□□□ 1.18
SCARB1-211ENST00000546215 ZSCAN23Q3MJ62 389 aa22.39■■□□□ 1.18
SCARB1-211ENST00000546215 KIAA1841Q6NSI8 718 aa22.39■■□□□ 1.18
SCARB1-211ENST00000546215 ADGRD2Q7Z7M1 963 aa22.39■■□□□ 1.18
SCARB1-211ENST00000546215 CEP57Q86XR8 500 aa22.39■■□□□ 1.18
SCARB1-211ENST00000546215 GPR65Q8IYL9 337 aa22.39■■□□□ 1.18
SCARB1-211ENST00000546215 ENOX1Q8TC92 643 aaKnown RBP22.39■■□□□ 1.18
SCARB1-211ENST00000546215 SLC35C1Q96A29 364 aa22.39■■□□□ 1.18
SCARB1-211ENST00000546215 ZNF560Q96MR9 790 aa22.39■■□□□ 1.18
SCARB1-211ENST00000546215 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.38■■□□□ 1.17
SCARB1-211ENST00000546215 KPNA7A9QM74 516 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 VNN1O95497 513 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 CCDC192P0DO97 292 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 GTF2H1P32780 548 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 BIRC3Q13489 604 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 TPD52L1Q16890 204 aaPredicted RBP22.38■■□□□ 1.17
SCARB1-211ENST00000546215 SV2CQ496J9 727 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 TCEAL5Q5H9L2 206 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 DCAF17Q5H9S7 520 aaPredicted RBP22.38■■□□□ 1.17
SCARB1-211ENST00000546215 RIN2Q8WYP3 895 aaPredicted RBP22.38■■□□□ 1.17
SCARB1-211ENST00000546215 SENP8Q96LD8 212 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 TMEM8AQ9HCN3 771 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 PCDHB8Q9UN66 801 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 SSX2IPQ9Y2D8 614 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 R3HCC1Q9Y3T6 440 aaKnown RBP22.38■■□□□ 1.17
SCARB1-211ENST00000546215 SPTBN5Q9NRC6 3674 aaKnown RBP22.38■■□□□ 1.17
SCARB1-211ENST00000546215 PHACTR2O75167 634 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 NCOA4Q13772 614 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 ANO6Q4KMQ2 910 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 TCERG1LQ5VWI1 586 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 DSTYKQ6XUX3 929 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 TRIM59Q8IWR1 403 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 LNX1Q8TBB1 728 aaPredicted RBP22.38■■□□□ 1.17
SCARB1-211ENST00000546215 PIK3R5Q8WYR1 880 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 HPDLQ96IR7 371 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 THAP9Q9H5L6 903 aa22.38■■□□□ 1.17
SCARB1-211ENST00000546215 STX10O60499 249 aa22.37■■□□□ 1.17
SCARB1-211ENST00000546215 CA8P35219 290 aa22.37■■□□□ 1.17
SCARB1-211ENST00000546215 MYO1EQ12965 1108 aa22.37■■□□□ 1.17
SCARB1-211ENST00000546215 TRPC3Q13507 836 aa22.37■■□□□ 1.17
SCARB1-211ENST00000546215 PRSS55Q6UWB4 352 aaPredicted RBP22.37■■□□□ 1.17
SCARB1-211ENST00000546215 MICALL1Q8N3F8 863 aa22.37■■□□□ 1.17
SCARB1-211ENST00000546215 CNOT6LQ96LI5 555 aaKnown RBP22.37■■□□□ 1.17
SCARB1-211ENST00000546215 XYLT2Q9H1B5 865 aa22.37■■□□□ 1.17
SCARB1-211ENST00000546215 MMRN2Q9H8L6 949 aa22.37■■□□□ 1.17
SCARB1-211ENST00000546215 RXFP1Q9HBX9 757 aa22.37■■□□□ 1.17
SCARB1-211ENST00000546215 GDAP2Q9NXN4 497 aa22.37■■□□□ 1.17
SCARB1-211ENST00000546215 STXBP5LQ9Y2K9 1186 aa22.37■■□□□ 1.17
SCARB1-211ENST00000546215 NFE2L3Q9Y4A8 694 aa22.37■■□□□ 1.17
SCARB1-211ENST00000546215 XIRP2A4UGR9 3374 aa22.36■■□□□ 1.17
SCARB1-211ENST00000546215 CYB561D2O14569 222 aa22.36■■□□□ 1.17
SCARB1-211ENST00000546215 MYL6P60660 151 aa22.36■■□□□ 1.17
SCARB1-211ENST00000546215 MRPL58Q14197 206 aaKnown RBP22.36■■□□□ 1.17
SCARB1-211ENST00000546215 CBWD6Q4V339 395 aa22.36■■□□□ 1.17
SCARB1-211ENST00000546215 CBWD3Q5JTY5 395 aa22.36■■□□□ 1.17
SCARB1-211ENST00000546215 CBWD5Q5RIA9 395 aa22.36■■□□□ 1.17
SCARB1-211ENST00000546215 KRT39Q6A163 491 aa22.36■■□□□ 1.17
SCARB1-211ENST00000546215 RBM23Q86U06 439 aaKnown RBP22.36■■□□□ 1.17
SCARB1-211ENST00000546215 APPL2Q8NEU8 664 aa22.36■■□□□ 1.17
SCARB1-211ENST00000546215 SAMSN1Q9NSI8 373 aaKnown RBP22.36■■□□□ 1.17
SCARB1-211ENST00000546215 TIMM13Q9Y5L4 95 aaPredicted RBP22.36■■□□□ 1.17
SCARB1-211ENST00000546215 PER2O15055 1255 aa22.35■■□□□ 1.17
SCARB1-211ENST00000546215 STAU1O95793 577 aaKnown RBP22.35■■□□□ 1.17
SCARB1-211ENST00000546215 CNPP09543 421 aaKnown RBP22.35■■□□□ 1.17
SCARB1-211ENST00000546215 ODC1P11926 461 aa22.35■■□□□ 1.17
SCARB1-211ENST00000546215 ATICP31939 592 aa22.35■■□□□ 1.17
SCARB1-211ENST00000546215 MXI1P50539 228 aa22.35■■□□□ 1.17
SCARB1-211ENST00000546215 HYAL1Q12794 435 aa22.35■■□□□ 1.17
SCARB1-211ENST00000546215 VARS2Q5ST30 1063 aaKnown RBP22.35■■□□□ 1.17
SCARB1-211ENST00000546215 TAS1R2Q8TE23 839 aa22.35■■□□□ 1.17
SCARB1-211ENST00000546215 PPP2R3CQ969Q6 453 aa22.35■■□□□ 1.17
SCARB1-211ENST00000546215 TLE6Q9H808 572 aa22.35■■□□□ 1.17
SCARB1-211ENST00000546215 VRTNQ9H8Y1 702 aa22.35■■□□□ 1.17
SCARB1-211ENST00000546215 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.35■■□□□ 1.17
SCARB1-211ENST00000546215 FNIP2Q9P278 1114 aa22.35■■□□□ 1.17
SCARB1-211ENST00000546215 HLA-DRAP01903 254 aa22.34■■□□□ 1.17
SCARB1-211ENST00000546215 CYP11A1P05108 521 aa22.34■■□□□ 1.17
SCARB1-211ENST00000546215 TYMPP19971 482 aa22.34■■□□□ 1.17
SCARB1-211ENST00000546215 GTF2F1P35269 517 aaKnown RBP eCLIP22.34■■□□□ 1.175e-7■■■□□ 18.9
SCARB1-211ENST00000546215 NRIP1P48552 1158 aa22.34■■□□□ 1.17
SCARB1-211ENST00000546215 CCDC85BQ15834 202 aaPredicted RBP22.34■■□□□ 1.17
SCARB1-211ENST00000546215 PSMD5Q16401 504 aa22.34■■□□□ 1.17
SCARB1-211ENST00000546215 DUSP6Q16828 381 aa22.34■■□□□ 1.17
SCARB1-211ENST00000546215 PDXDC1Q6P996 788 aa22.34■■□□□ 1.17
SCARB1-211ENST00000546215 ANKS3Q6ZW76 656 aa22.34■■□□□ 1.17
SCARB1-211ENST00000546215 KLHL5Q96PQ7 755 aa22.34■■□□□ 1.17
SCARB1-211ENST00000546215 BPIFA3Q9BQP9 254 aa22.34■■□□□ 1.17
SCARB1-211ENST00000546215 CLSTN3Q9BQT9 956 aa22.34■■□□□ 1.17
SCARB1-211ENST00000546215 NAT10Q9H0A0 1025 aaKnown RBP22.34■■□□□ 1.17
SCARB1-211ENST00000546215 MTRRQ9UBK8 725 aa22.34■■□□□ 1.17
SCARB1-211ENST00000546215 SNX9Q9Y5X1 595 aa22.34■■□□□ 1.17
SCARB1-211ENST00000546215 TEX28O15482 410 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms