RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 CES5AQ6NT32 575 aa18.84■□□□□ 0.61
CD9-211ENST00000546073 TRAPPC11Q7Z392 1133 aa18.84■□□□□ 0.61
CD9-211ENST00000546073 PARD3BQ8TEW8 1205 aa18.84■□□□□ 0.61
CD9-211ENST00000546073 HPDLQ96IR7 371 aa18.84■□□□□ 0.61
CD9-211ENST00000546073 SENP8Q96LD8 212 aa18.84■□□□□ 0.61
CD9-211ENST00000546073 RXFP1Q9HBX9 757 aa18.84■□□□□ 0.61
CD9-211ENST00000546073 ARMCX3Q9UH62 379 aaPredicted RBP18.84■□□□□ 0.61
CD9-211ENST00000546073 PCDHGC5Q9Y5F6 944 aa18.84■□□□□ 0.61
CD9-211ENST00000546073 BACE2Q9Y5Z0 518 aa18.84■□□□□ 0.61
CD9-211ENST00000546073 TDRD15B5MCY1 1934 aaKnown RBP18.84■□□□□ 0.61
CD9-211ENST00000546073 TEX28O15482 410 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 LETM1O95202 739 aaPredicted RBP18.83■□□□□ 0.6
CD9-211ENST00000546073 SLC34A2O95436 690 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 CCDC192P0DO97 292 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 TYMPP19971 482 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 ATICP31939 592 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 NLRP12P59046 1061 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 TNNC1P63316 161 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 SKOR2Q2VWA4 1001 aaPredicted RBP18.83■□□□□ 0.6
CD9-211ENST00000546073 CT47A1Q5JQC4 288 aaPredicted RBP18.83■□□□□ 0.6
CD9-211ENST00000546073 RTP2Q5QGT7 225 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 VARS2Q5ST30 1063 aaKnown RBP18.83■□□□□ 0.6
CD9-211ENST00000546073 LMBRD2Q68DH5 695 aaPredicted RBP18.83■□□□□ 0.6
CD9-211ENST00000546073 OVOS1Q6IE37 1185 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 FOXR2Q6PJQ5 311 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 PRSS55Q6UWB4 352 aaPredicted RBP18.83■□□□□ 0.6
CD9-211ENST00000546073 CREBRFQ8IUR6 639 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 GLYCTKQ8IVS8 523 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 RNF168Q8IYW5 571 aaPredicted RBP18.83■□□□□ 0.6
CD9-211ENST00000546073 C1orf127Q8N9H9 656 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 C3orf58Q8NDZ4 430 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 B3GALT6Q96L58 329 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 VN1R3Q9BXE9 311 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 PLEKHA4Q9H4M7 779 aa18.83■□□□□ 0.6
CD9-211ENST00000546073 MYO9BQ13459 2157 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 OR6C75A6NL08 312 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 M0QZQ0 153 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 AKAP3O75969 853 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 CPB1P15086 417 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 GTF2H1P32780 548 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 CASP4P49662 377 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 ARPP19P56211 112 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 DCAF17Q5H9S7 520 aaPredicted RBP18.82■□□□□ 0.6
CD9-211ENST00000546073 FILIP1Q7Z7B0 1213 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 PALB2Q86YC2 1186 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 FAM114A1Q8IWE2 563 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 LNX1Q8TBB1 728 aaPredicted RBP18.82■□□□□ 0.6
CD9-211ENST00000546073 GPT2Q8TD30 523 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 HDAC7Q8WUI4 952 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 MMS19Q96T76 1030 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 POP1Q99575 1024 aaKnown RBP18.82■□□□□ 0.6
CD9-211ENST00000546073 MAGEC2Q9UBF1 373 aaPredicted RBP18.82■□□□□ 0.6
CD9-211ENST00000546073 RWDD2AQ9UIY3 292 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 CD207Q9UJ71 328 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 HCFC2Q9Y5Z7 792 aa18.82■□□□□ 0.6
CD9-211ENST00000546073 PPP1R3GB7ZBB8 358 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 OR1D2P34982 312 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 STX17P56962 302 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 MYL7Q01449 175 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 SGSM1Q2NKQ1 1148 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 ZCWPW2Q504Y3 356 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 CCDC149Q6ZUS6 474 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 DPH6Q7L8W6 267 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 TMEM86AQ8N2M4 240 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 OR5B17Q8NGF7 314 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 NAT10Q9H0A0 1025 aaKnown RBP18.81■□□□□ 0.6
CD9-211ENST00000546073 MMRN2Q9H8L6 949 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 ANO10Q9NW15 660 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 MTRRQ9UBK8 725 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 SNX9Q9Y5X1 595 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 CDY1Q9Y6F8 540 aa18.81■□□□□ 0.6
CD9-211ENST00000546073 COL4A4P53420 1690 aaPredicted RBP18.8■□□□□ 0.6
CD9-211ENST00000546073 LRRIQ3A6PVS8 624 aaPredicted RBP18.8■□□□□ 0.6
CD9-211ENST00000546073 LILRB3O75022 631 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 N4BP1O75113 896 aaKnown RBP18.8■□□□□ 0.6
CD9-211ENST00000546073 EFEMP2O95967 443 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 PIK3CAP42336 1068 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 LHX1P48742 406 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 AARSP49588 968 aaKnown RBP eCLIP18.8■□□□□ 0.6
CD9-211ENST00000546073 CLCN4P51793 760 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 TSPY1Q01534 308 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 WDR44Q5JSH3 913 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 TMEM184AQ6ZMB5 413 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 FRMD5Q7Z6J6 570 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.8■□□□□ 0.6
CD9-211ENST00000546073 SPATA18Q8TC71 538 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 TAF4BQ92750 862 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 SFXN1Q9H9B4 322 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 PIDD1Q9HB75 910 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 MAFFQ9ULX9 164 aa18.8■□□□□ 0.6
CD9-211ENST00000546073 CITO14578 2027 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.79■□□□□ 0.6
CD9-211ENST00000546073 TRIM49BA6NDI0 452 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 PRRG1O14668 218 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 TPM2P07951 284 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 RPL17P18621 184 aaKnown RBP18.79■□□□□ 0.6
CD9-211ENST00000546073 ERCC5P28715 1186 aaPredicted RBP18.79■□□□□ 0.6
CD9-211ENST00000546073 GTF2F1P35269 517 aaKnown RBP eCLIP18.79■□□□□ 0.6
CD9-211ENST00000546073 ITIH3Q06033 890 aa18.79■□□□□ 0.6
CD9-211ENST00000546073 NCOA4Q13772 614 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms