RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CEP57Q86XR8 500 aa22.08■■□□□ 1.12
HMGA2-211ENST00000545998 ZNF560Q96MR9 790 aa22.08■■□□□ 1.12
HMGA2-211ENST00000545998 ARMCX3Q9UH62 379 aaPredicted RBP22.08■■□□□ 1.12
HMGA2-211ENST00000545998 SSX2IPQ9Y2D8 614 aa22.08■■□□□ 1.12
HMGA2-211ENST00000545998 TSC2P49815 1807 aa22.07■■□□□ 1.12
HMGA2-211ENST00000545998 SYN3O14994 580 aa22.07■■□□□ 1.12
HMGA2-211ENST00000545998 CST3P01034 146 aaPredicted RBP22.07■■□□□ 1.12
HMGA2-211ENST00000545998 C15orf39Q6ZRI6 1047 aa22.07■■□□□ 1.12
HMGA2-211ENST00000545998 RIN2Q8WYP3 895 aaPredicted RBP22.07■■□□□ 1.12
HMGA2-211ENST00000545998 PIK3R5Q8WYR1 880 aa22.07■■□□□ 1.12
HMGA2-211ENST00000545998 METTL14Q9HCE5 456 aaKnown RBP22.07■■□□□ 1.12
HMGA2-211ENST00000545998 PCDHB8Q9UN66 801 aa22.07■■□□□ 1.12
HMGA2-211ENST00000545998 UNC80Q8N2C7 3258 aa22.06■■□□□ 1.12
HMGA2-211ENST00000545998 LETM1O95202 739 aaPredicted RBP22.06■■□□□ 1.12
HMGA2-211ENST00000545998 FGFR1OPO95684 399 aaKnown RBP22.06■■□□□ 1.12
HMGA2-211ENST00000545998 GNA14O95837 355 aa22.06■■□□□ 1.12
HMGA2-211ENST00000545998 CA8P35219 290 aa22.06■■□□□ 1.12
HMGA2-211ENST00000545998 PPP3CAQ08209 521 aa22.06■■□□□ 1.12
HMGA2-211ENST00000545998 ZACNQ401N2 412 aa22.06■■□□□ 1.12
HMGA2-211ENST00000545998 SV2CQ496J9 727 aa22.06■■□□□ 1.12
HMGA2-211ENST00000545998 DSTYKQ6XUX3 929 aa22.06■■□□□ 1.12
HMGA2-211ENST00000545998 C11orf57Q6ZUT1 292 aaPredicted RBP22.06■■□□□ 1.12
HMGA2-211ENST00000545998 SV2AQ7L0J3 742 aa22.06■■□□□ 1.12
HMGA2-211ENST00000545998 LNX1Q8TBB1 728 aaPredicted RBP22.06■■□□□ 1.12
HMGA2-211ENST00000545998 PPP2R3CQ969Q6 453 aa22.06■■□□□ 1.12
HMGA2-211ENST00000545998 SENP8Q96LD8 212 aa22.06■■□□□ 1.12
HMGA2-211ENST00000545998 RXFP1Q9HBX9 757 aa22.06■■□□□ 1.12
HMGA2-211ENST00000545998 KPNA7A9QM74 516 aa22.05■■□□□ 1.12
HMGA2-211ENST00000545998 VNN1O95497 513 aa22.05■■□□□ 1.12
HMGA2-211ENST00000545998 GTF2H1P32780 548 aa22.05■■□□□ 1.12
HMGA2-211ENST00000545998 GCLMP48507 274 aa22.05■■□□□ 1.12
HMGA2-211ENST00000545998 MARSP56192 900 aaKnown RBP22.05■■□□□ 1.12
HMGA2-211ENST00000545998 HYAL1Q12794 435 aa22.05■■□□□ 1.12
HMGA2-211ENST00000545998 BIRC3Q13489 604 aa22.05■■□□□ 1.12
HMGA2-211ENST00000545998 CCDC85BQ15834 202 aaPredicted RBP22.05■■□□□ 1.12
HMGA2-211ENST00000545998 CCDC40Q4G0X9 1142 aa22.05■■□□□ 1.12
HMGA2-211ENST00000545998 PRSS55Q6UWB4 352 aaPredicted RBP22.05■■□□□ 1.12
HMGA2-211ENST00000545998 MAFAQ8NHW3 353 aaPredicted RBP22.05■■□□□ 1.12
HMGA2-211ENST00000545998 HPDLQ96IR7 371 aa22.05■■□□□ 1.12
HMGA2-211ENST00000545998 TLE6Q9H808 572 aa22.05■■□□□ 1.12
HMGA2-211ENST00000545998 R3HCC1Q9Y3T6 440 aaKnown RBP22.05■■□□□ 1.12
HMGA2-211ENST00000545998 PER2O15055 1255 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 PHACTR2O75167 634 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 CNPP09543 421 aaKnown RBP22.04■■□□□ 1.12
HMGA2-211ENST00000545998 NRIP1P48552 1158 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 MYO1EQ12965 1108 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 DUSP6Q16828 381 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 DCAF17Q5H9S7 520 aaPredicted RBP22.04■■□□□ 1.12
HMGA2-211ENST00000545998 RBM23Q86U06 439 aaKnown RBP22.04■■□□□ 1.12
HMGA2-211ENST00000545998 APPL2Q8NEU8 664 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 SLC35C1Q96A29 364 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 TMEM8AQ9HCN3 771 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.04■■□□□ 1.12
HMGA2-211ENST00000545998 FNIP2Q9P278 1114 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 ODC1P11926 461 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 GTF2F1P35269 517 aaKnown RBP eCLIP22.04■■□□□ 1.125e-12■■□□□ 13.3
HMGA2-211ENST00000545998 TRPC3Q13507 836 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 NCOA4Q13772 614 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 MRPL58Q14197 206 aaKnown RBP22.04■■□□□ 1.12
HMGA2-211ENST00000545998 PSMD5Q16401 504 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 TPD52L1Q16890 204 aaPredicted RBP22.04■■□□□ 1.12
HMGA2-211ENST00000545998 VARS2Q5ST30 1063 aaKnown RBP22.04■■□□□ 1.12
HMGA2-211ENST00000545998 TCERG1LQ5VWI1 586 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 PDXDC1Q6P996 788 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 ANKS3Q6ZW76 656 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 IRF2BP1Q8IU81 584 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 PPM1EQ8WY54 764 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 KLHL5Q96PQ7 755 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 CDCA3Q99618 268 aaPredicted RBP22.04■■□□□ 1.12
HMGA2-211ENST00000545998 FUCA2Q9BTY2 467 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 EMILIN2Q9BXX0 1053 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 XYLT2Q9H1B5 865 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 DNAJC25Q9H1X3 360 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 GDAP2Q9NXN4 497 aa22.04■■□□□ 1.12
HMGA2-211ENST00000545998 SYCE3A1L190 88 aa22.03■■□□□ 1.12
HMGA2-211ENST00000545998 CYB561D2O14569 222 aa22.03■■□□□ 1.12
HMGA2-211ENST00000545998 TEX28O15482 410 aa22.03■■□□□ 1.12
HMGA2-211ENST00000545998 STX10O60499 249 aa22.03■■□□□ 1.12
HMGA2-211ENST00000545998 CLASP2O75122 1294 aaKnown RBP22.03■■□□□ 1.12
HMGA2-211ENST00000545998 TYMPP19971 482 aa22.03■■□□□ 1.12
HMGA2-211ENST00000545998 MYL6P60660 151 aa22.03■■□□□ 1.12
HMGA2-211ENST00000545998 CREMQ03060 361 aa22.03■■□□□ 1.12
HMGA2-211ENST00000545998 TRIM59Q8IWR1 403 aa22.03■■□□□ 1.12
HMGA2-211ENST00000545998 ENOX1Q8TC92 643 aaKnown RBP22.03■■□□□ 1.12
HMGA2-211ENST00000545998 THAP9Q9H5L6 903 aa22.03■■□□□ 1.12
HMGA2-211ENST00000545998 MMRN2Q9H8L6 949 aa22.03■■□□□ 1.12
HMGA2-211ENST00000545998 MTRRQ9UBK8 725 aa22.03■■□□□ 1.12
HMGA2-211ENST00000545998 TIMM13Q9Y5L4 95 aaPredicted RBP22.03■■□□□ 1.12
HMGA2-211ENST00000545998 PLXNA3P51805 1871 aa22.02■■□□□ 1.12
HMGA2-211ENST00000545998 ARHGEF37A1IGU5 675 aa22.02■■□□□ 1.12
HMGA2-211ENST00000545998 STAU1O95793 577 aaKnown RBP22.02■■□□□ 1.12
HMGA2-211ENST00000545998 CYP11A1P05108 521 aa22.02■■□□□ 1.12
HMGA2-211ENST00000545998 CCDC192P0DO97 292 aa22.02■■□□□ 1.12
HMGA2-211ENST00000545998 RPL17P18621 184 aaKnown RBP22.02■■□□□ 1.12
HMGA2-211ENST00000545998 ATICP31939 592 aa22.02■■□□□ 1.12
HMGA2-211ENST00000545998 COL19A1Q14993 1142 aa22.02■■□□□ 1.12
HMGA2-211ENST00000545998 KRT39Q6A163 491 aa22.02■■□□□ 1.12
HMGA2-211ENST00000545998 CNOT6LQ96LI5 555 aaKnown RBP22.02■■□□□ 1.12
HMGA2-211ENST00000545998 CLSTN3Q9BQT9 956 aa22.02■■□□□ 1.12
HMGA2-211ENST00000545998 IGFLR1Q9H665 355 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms