RNA–Protein interactions for RNA: ENST00000545620.5

SMAD5-212, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD5, Length 6,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-212ENST00000545620 FAM210AQ96ND0 272 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 CELF4Q9BZC1 486 aaKnown RBP5.06□□□□□ -1.6
SMAD5-212ENST00000545620 NUF2Q9BZD4 464 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 KIF9Q9HAQ2 790 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 DDX28Q9NUL7 540 aaKnown RBP5.06□□□□□ -1.6
SMAD5-212ENST00000545620 SNX12Q9UMY4 172 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 MAGED1Q9Y5V3 778 aaPredicted RBP5.06□□□□□ -1.6
SMAD5-212ENST00000545620 ZSCAN12O43309 604 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 MMEP08473 750 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 KAZNQ674X7 775 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 TRIM74Q86UV6 250 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 TRIM73Q86UV7 250 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 UBR7Q8N806 425 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.06□□□□□ -1.6
SMAD5-212ENST00000545620 TWNKQ96RR1 684 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 SDCBP2Q9H190 292 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 VCX3AQ9NNX9 186 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 ETAA1Q9NY74 926 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 STIM2Q9P246 746 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 BOD1L1Q8NFC6 3051 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 H0YGN5 161 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 PPEF2O14830 753 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 MTIF2P46199 727 aaKnown RBP5.06□□□□□ -1.6
SMAD5-212ENST00000545620 INPP1P49441 399 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 NT5C2P49902 561 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 VAV2P52735 878 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 ORC1Q13415 861 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 CAPSQ13938 189 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 ODR4Q5SWX8 454 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 ARHGAP27Q6ZUM4 889 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 EFCAB13Q8IY85 973 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 CALML4Q96GE6 196 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 TRIM8Q9BZR9 551 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 ABCF3Q9NUQ8 709 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 MTRF1LQ9UGC7 380 aaKnown RBP5.06□□□□□ -1.6
SMAD5-212ENST00000545620 LCMT1Q9UIC8 334 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 NFS1Q9Y697 457 aa5.06□□□□□ -1.6
SMAD5-212ENST00000545620 EMSYQ7Z589 1322 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 ACOT2P49753 483 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 PEX5P50542 639 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 LAMB3Q13751 1172 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 SLC18A3Q16572 532 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 DCAF17Q5H9S7 520 aaPredicted RBP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 ATAD3BQ5T9A4 648 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 FOXR2Q6PJQ5 311 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 ZNF574Q6ZN55 896 aaPredicted RBP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 NLRP9Q7RTR0 991 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 SRGAP1Q7Z6B7 1085 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 MYCT1Q8N699 235 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 LINC01465Q8N7H1 131 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 TNIP2Q8NFZ5 429 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 EPS8L1Q8TE68 723 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 RUNDC3BQ96NL0 473 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 OSBPL9Q96SU4 736 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 WDR83Q9BRX9 315 aaKnown RBP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 DHX33Q9H6R0 707 aaKnown RBP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 COG4Q9H9E3 785 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 PTPRHQ9HD43 1115 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 SCHIP1Q9P0W5 487 aaPredicted RBP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 GCNT4Q9P109 453 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 VWA8A3KMH1 1905 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 CDC40O60508 579 aaKnown RBP eCLIP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 LYPLA2O95372 231 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 SNAI1O95863 264 aaPredicted RBP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 NUP62P37198 522 aaPredicted RBP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 ERVK-9P63128 1117 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 ATP13A4Q4VNC1 1196 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 CCDC122Q5T0U0 273 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 CYP4V2Q6ZWL3 525 aaPredicted RBP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 CNGA4Q8IV77 575 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 LRRC71Q8N4P6 559 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 CDCA5Q96FF9 252 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 CFAP36Q96G28 342 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 TYW1Q9NV66 732 aaKnown RBP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 RRP15Q9Y3B9 282 aaKnown RBP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 PTPRDP23468 1912 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 CIB2O75838 187 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 NAB2Q15742 525 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 TTMPQ5BVD1 217 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 PRAMEF19Q5SWL8 479 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 SDE2Q6IQ49 451 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 KRT74Q7RTS7 529 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 HAUS6Q7Z4H7 955 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 NT5DC3Q86UY8 548 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 AGGF1Q8N302 714 aaeCLIP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 ZNF397Q8NF99 534 aaPredicted RBP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 ARHGEF2Q92974 986 aaKnown RBP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 B3GALT6Q96L58 329 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 FAM118BQ9BPY3 351 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 TMEM30AQ9NV96 361 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 HSPBP1Q9NZL4 362 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 DNM3Q9UQ16 869 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 SCINQ9Y6U3 715 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 NPTXRO95502 500 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 APOEP02649 317 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 MYL3P08590 195 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 CD53P19397 219 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 PRKCIP41743 596 aa5.05□□□□□ -1.6
SMAD5-212ENST00000545620 ALDH5A1P51649 535 aaPredicted RBP5.05□□□□□ -1.6
SMAD5-212ENST00000545620 GAD2Q05329 585 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms