RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 TSHZ1Q6ZSZ6 1077 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 APBB1IPQ7Z5R6 666 aaPredicted RBP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 SAPCD2Q86UD0 394 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 GLYCTKQ8IVS8 523 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 BRSK2Q8IWQ3 736 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 FAM71AQ8IYT1 594 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 SYCE1Q8N0S2 351 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 LRRN4CLQ8ND94 238 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 NPLOC4Q8TAT6 608 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 TRAPPC12Q8WVT3 735 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 SHC3Q92529 594 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 DHX38Q92620 1227 aaKnown RBP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 TAF4BQ92750 862 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 SEMA4DQ92854 862 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 ZBTB45Q96K62 511 aaPredicted RBP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 SCLT1Q96NL6 688 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 POP1Q99575 1024 aaKnown RBP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 ACO2Q99798 780 aaKnown RBP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 AGPAT1Q99943 283 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 NFKBIZQ9BYH8 718 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 GPR88Q9GZN0 384 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 RNPEPQ9H4A4 650 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 TUT1Q9H6E5 874 aaKnown RBP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 PDE11AQ9HCR9 933 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 CUEDC1Q9NWM3 386 aaPredicted RBP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 PUF60Q9UHX1 559 aaKnown RBP7.56□□□□□ -1.2
SPPL3-209ENST00000545209 NENFQ9UMX5 172 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 SNX12Q9UMY4 172 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 AKT3Q9Y243 479 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 PCDHGC5Q9Y5F6 944 aa7.56□□□□□ -1.2
SPPL3-209ENST00000545209 NCANO14594 1321 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.55□□□□□ -1.2
SPPL3-209ENST00000545209 CDC14CA4D256 554 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 TNPO2O14787 897 aaKnown RBP7.55□□□□□ -1.2
SPPL3-209ENST00000545209 BUB1O43683 1085 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 PALMO75781 387 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 IL18RAPO95256 599 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 TMEM253P0C7T8 217 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 KRT5P13647 590 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 TBXAS1P24557 533 aaPredicted RBP7.55□□□□□ -1.2
SPPL3-209ENST00000545209 PAFAH1B1P43034 410 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 CDC42EP1Q00587 391 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 INSM1Q01101 510 aaPredicted RBP7.55□□□□□ -1.2
SPPL3-209ENST00000545209 NAA30Q147X3 362 aaPredicted RBP7.55□□□□□ -1.2
SPPL3-209ENST00000545209 GRIK4Q16099 956 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 FAM187BQ17R55 369 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 TMEM63BQ5T3F8 832 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 TDRD10Q5VZ19 366 aaKnown RBP7.55□□□□□ -1.2
SPPL3-209ENST00000545209 OLFML2BQ68BL8 750 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 CRELD2Q6UXH1 353 aaPredicted RBP7.55□□□□□ -1.2
SPPL3-209ENST00000545209 C15orf39Q6ZRI6 1047 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 RIPOR1Q6ZS17 1223 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 RSRC2Q7L4I2 434 aaKnown RBP7.55□□□□□ -1.2
SPPL3-209ENST00000545209 ZNF410Q86VK4 478 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 WDR49Q8IV35 697 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 SLC30A5Q8TAD4 765 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 LNX1Q8TBB1 728 aaPredicted RBP7.55□□□□□ -1.2
SPPL3-209ENST00000545209 HELQQ8TDG4 1101 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 RHBDD1Q8TEB9 315 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 RFFLQ8WZ73 363 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 KREMEN1Q96MU8 473 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 GAS2L1Q99501 681 aaPredicted RBP7.55□□□□□ -1.2
SPPL3-209ENST00000545209 APBA2Q99767 749 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 C16orf70Q9BSU1 422 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 SYT11Q9BT88 431 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 PACSIN1Q9BY11 444 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 AP5M1Q9H0R1 490 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 FZD8Q9H461 694 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 DNAAF2Q9NVR5 837 aaKnown RBP7.55□□□□□ -1.2
SPPL3-209ENST00000545209 HDAC6Q9UBN7 1215 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 RNF14Q9UBS8 474 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 TNFSF13BQ9Y275 285 aa7.55□□□□□ -1.2
SPPL3-209ENST00000545209 CNTNAP2Q9UHC6 1331 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 ANKRD62A6NC57 917 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 A6NJY4 79 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 CDK2AP1O14519 115 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 CYP26A1O43174 497 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 DYNC1LI2O43237 492 aaPredicted RBP7.54□□□□□ -1.2
SPPL3-209ENST00000545209 RTN2O75298 545 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 ERLIN2O94905 339 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 TNNC2P02585 160 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 F11P03951 625 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 C4BPAP04003 597 aaKnown RBP7.54□□□□□ -1.2
SPPL3-209ENST00000545209 CLTAP09496 248 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 TMEM191BP0C7N4 346 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 MCF2P10911 925 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 GZMAP12544 262 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 PROZP22891 400 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 MCM3P25205 808 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 CPT1AP50416 773 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 GALCP54803 685 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 YWHAEP62258 255 aaKnown RBP7.54□□□□□ -1.2
SPPL3-209ENST00000545209 POU5F1Q01860 360 aaKnown RBP7.54□□□□□ -1.2
SPPL3-209ENST00000545209 MBTD1Q05BQ5 628 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 MTFR1Q15390 333 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 DUOXA2Q1HG44 320 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 LMBRD2Q68DH5 695 aaPredicted RBP7.54□□□□□ -1.2
SPPL3-209ENST00000545209 MTHFD1LQ6UB35 978 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 C17orf99Q6UX52 265 aa7.54□□□□□ -1.2
SPPL3-209ENST00000545209 TLK2Q86UE8 772 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms