RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 EPS8L3Q8TE67 593 aaKnown RBP6.12□□□□□ -1.43
VPS50-220ENST00000544910 SERPINB12Q96P63 405 aa6.12□□□□□ -1.43
VPS50-220ENST00000544910 CGRRF1Q99675 332 aa6.12□□□□□ -1.43
VPS50-220ENST00000544910 APOL6Q9BWW8 343 aa6.12□□□□□ -1.43
VPS50-220ENST00000544910 FOXP3Q9BZS1 431 aa6.12□□□□□ -1.43
VPS50-220ENST00000544910 KIAA1683Q9H0B3 1180 aa6.12□□□□□ -1.43
VPS50-220ENST00000544910 SLC38A10Q9HBR0 1119 aa6.12□□□□□ -1.43
VPS50-220ENST00000544910 MLXIPLQ9NP71 852 aa6.12□□□□□ -1.43
VPS50-220ENST00000544910 HAUS2Q9NVX0 235 aa6.12□□□□□ -1.43
VPS50-220ENST00000544910 SCAF8Q9UPN6 1271 aaKnown RBP6.12□□□□□ -1.43
VPS50-220ENST00000544910 NAMPTP43490 491 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 RARRES1P49788 294 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 DLG4P78352 724 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 SHROOM1Q2M3G4 852 aaPredicted RBP6.11□□□□□ -1.43
VPS50-220ENST00000544910 EPC2Q52LR7 807 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 FOXR1Q6PIV2 292 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 SPATA21Q7Z572 469 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 RIBC1Q8N443 379 aaPredicted RBP6.11□□□□□ -1.43
VPS50-220ENST00000544910 ATP11CQ8NB49 1132 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 RBM46Q8TBY0 533 aaKnown RBP6.11□□□□□ -1.43
VPS50-220ENST00000544910 GFM2Q969S9 779 aaKnown RBP6.11□□□□□ -1.43
VPS50-220ENST00000544910 ANGPTL2Q9UKU9 493 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 COMMD10Q9Y6G5 202 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.11□□□□□ -1.43
VPS50-220ENST00000544910 CAPN9O14815 690 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 MAP3K7O43318 606 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 TBC1D12O60347 775 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 PLA2G6O60733 806 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 RALAP11233 206 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 ARL4AP40617 200 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 GMPSP49915 693 aaPredicted RBP6.11□□□□□ -1.43
VPS50-220ENST00000544910 ITIH4Q14624 930 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 PDCD2Q16342 344 aaPredicted RBP6.11□□□□□ -1.43
VPS50-220ENST00000544910 FBXW10Q5XX13 1052 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 ST13P4Q8IZP2 240 aaPredicted RBP6.11□□□□□ -1.43
VPS50-220ENST00000544910 RNF149Q8NC42 400 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 WDR91A4D1P6 747 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 CAND2O75155 1236 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 IL18RAPO95256 599 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 SLURP2P0DP57 97 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 TFDP2Q14188 446 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 DPP9Q86TI2 863 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 MAP4K3Q8IVH8 894 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 TTC39CQ8N584 583 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 MDM1Q8TC05 714 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 SPIRE2Q8WWL2 714 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 RBM15Q96T37 977 aaKnown RBP eCLIP6.11□□□□□ -1.43
VPS50-220ENST00000544910 OSBPL8Q9BZF1 889 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 PPCSQ9HAB8 311 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 NEU2Q9Y3R4 380 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 ATP8B3O60423 1300 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 SYNJ2BP-COX16A0A087WUM0 186 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 PI4K2BG5E9Z4 385 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 MGEA5O60502 916 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 KCNJ1P48048 391 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 BACE1P56817 501 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 IFRD2Q12894 506 aaPredicted RBP6.11□□□□□ -1.43
VPS50-220ENST00000544910 HIF1AQ16665 826 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 HP1BP3Q5SSJ5 553 aaPredicted RBP6.11□□□□□ -1.43
VPS50-220ENST00000544910 FKBP1CQ5VVH2 108 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 ATG16L1Q676U5 607 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 SLC51AQ86UW1 340 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 SLC9A9Q8IVB4 645 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 TAS1R2Q8TE23 839 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 HES6Q96HZ4 224 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 HSD17B14Q9BPX1 270 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 PDCD2LQ9BRP1 358 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 TAS2R14Q9NYV8 317 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 COX16Q9P0S2 106 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 PCDHA3Q9Y5H8 950 aa6.11□□□□□ -1.43
VPS50-220ENST00000544910 COL16A1Q07092 1604 aaPredicted RBP6.11□□□□□ -1.43
VPS50-220ENST00000544910 PABPN1LA6NDY0 278 aaKnown RBP6.1□□□□□ -1.43
VPS50-220ENST00000544910 TGFB1I1O43294 461 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 TLR2O60603 784 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 CYP1A2P05177 515 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 NCKAP1LP55160 1127 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 ESRRGP62508 458 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 SATB1Q01826 763 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 PRPSAP1Q14558 356 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 ANGEL2Q5VTE6 544 aaKnown RBP6.1□□□□□ -1.43
VPS50-220ENST00000544910 FAM47EQ6ZV65 393 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 NOP9Q86U38 636 aaKnown RBP6.1□□□□□ -1.43
VPS50-220ENST00000544910 CFAP61Q8NHU2 1237 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 GABPB2Q8TAK5 448 aaPredicted RBP6.1□□□□□ -1.43
VPS50-220ENST00000544910 LRRC15Q8TF66 581 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 FAM118BQ9BPY3 351 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 NIF3L1Q9GZT8 377 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 DEFB129Q9H1M3 183 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 CCDC68Q9H2F9 335 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 SENP1Q9P0U3 644 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 ZFP69BQ9UJL9 534 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 SMG5Q9UPR3 1016 aaKnown RBP6.1□□□□□ -1.43
VPS50-220ENST00000544910 ARL2BPQ9Y2Y0 163 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 PCDHA2Q9Y5H9 948 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 UBIAD1Q9Y5Z9 338 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 CACNA1SQ13698 1873 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 KRT3P12035 628 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 RARGP13631 454 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 GTF2BQ00403 316 aa6.1□□□□□ -1.43
VPS50-220ENST00000544910 ACTN3Q08043 901 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms