RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 FAM160B1Q5W0V3 765 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 SCARA3Q6AZY7 606 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 FBXL19Q6PCT2 694 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 TXNDC11Q6PKC3 985 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 GLB1LQ6UWU2 654 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 TPRG1Q6ZUI0 275 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 LONP2Q86WA8 852 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 HOMER1Q86YM7 354 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 TRIM42Q8IWZ5 723 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 SIRT2Q8IXJ6 389 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 DMRTC2Q8IXT2 367 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-220ENST00000544550 KIAA0319LQ8IZA0 1049 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 URGCPQ8TCY9 931 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 TRAPPC12Q8WVT3 735 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 SLC7A3Q8WY07 619 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 ZCCHC14Q8WYQ9 949 aaKnown RBP4.62□□□□□ -1.67
SNHG1-220ENST00000544550 MAP4K1Q92918 833 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 ZBTB10Q96DT7 871 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 LOXL4Q96JB6 756 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 EAF1Q96JC9 268 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-220ENST00000544550 FAM193BQ96PV7 902 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-220ENST00000544550 MAP7D2Q96T17 732 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 SDF4Q9BRK5 362 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 UBAC1Q9BSL1 405 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 PHF20Q9BVI0 1012 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 LSM14BQ9BX40 385 aaKnown RBP4.62□□□□□ -1.67
SNHG1-220ENST00000544550 NT5C1AQ9BXI3 368 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 NT5C3AQ9H0P0 336 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 ZFP64Q9NPA5 681 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 CHST12Q9NRB3 414 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 ZBTB40Q9NUA8 1239 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 CACNA2D2Q9NY47 1150 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 CDH7Q9ULB5 785 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 CEP131Q9UPN4 1083 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 MTF2Q9Y483 593 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-220ENST00000544550 TELO2Q9Y4R8 837 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 PCDHB5Q9Y5E4 795 aa4.62□□□□□ -1.67
SNHG1-220ENST00000544550 DENND4AQ7Z401 1863 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 ZNF213O14771 459 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 MAGEB2O15479 319 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 RFPL2O75678 378 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 ALDH2P05091 517 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 GSTP1P09211 210 aaKnown RBP4.61□□□□□ -1.67
SNHG1-220ENST00000544550 ZNF806P0C7X5 589 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 CXCL12P48061 93 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 RAB27AP51159 221 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 NOVA1P51513 510 aaKnown RBP4.61□□□□□ -1.67
SNHG1-220ENST00000544550 AK2P54819 239 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 ACTR2P61160 394 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 HAND2P61296 217 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 CDC42EP1Q00587 391 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 GSTM4Q03013 218 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 CREMQ03060 361 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 FAM160A1Q05DH4 1040 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 SF3A1Q15459 793 aaKnown RBP4.61□□□□□ -1.67
SNHG1-220ENST00000544550 MCMDC2Q4G0Z9 681 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 NOMO2Q5JPE7 1267 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 IFIT1BQ5T764 474 aaKnown RBP4.61□□□□□ -1.67
SNHG1-220ENST00000544550 STPG1Q5TH74 334 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 DAB2IPQ5VWQ8 1189 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 TSHZ3Q63HK5 1081 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 PARM1Q6UWI2 310 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 CEP68Q76N32 757 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 TMEM173Q86WV6 379 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-220ENST00000544550 KRTAP19-1Q8IUB9 90 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 MAP4K3Q8IVH8 894 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 GPR65Q8IYL9 337 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 DTWD1Q8N5C7 304 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 METTL13Q8N6R0 699 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 ENAHQ8N8S7 591 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-220ENST00000544550 GOLM1Q8NBJ4 401 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 GALNT11Q8NCW6 608 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 GRIN3AQ8TCU5 1115 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 DNASE1L2Q92874 299 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 GATA6Q92908 595 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 FGF14Q92915 247 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 ZNF707Q96C28 371 aaPredicted RBP4.61□□□□□ -1.67
SNHG1-220ENST00000544550 PGBD4Q96DM1 585 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 KLHDC7BQ96G42 594 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 DRC1Q96MC2 740 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 RPS6KC1Q96S38 1066 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 PIGSQ96S52 555 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 PCYT2Q99447 389 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 TMEM175Q9BSA9 504 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 HERC2P3Q9BVR0 1158 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 KRT23Q9C075 422 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 RIOX1Q9H6W3 641 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 NRDE2Q9H7Z3 1164 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 JADE2Q9NQC1 790 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.61□□□□□ -1.67
SNHG1-220ENST00000544550 TBC1D13Q9NVG8 400 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 MAD2L2Q9UI95 211 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 AKT3Q9Y243 479 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 FAN1Q9Y2M0 1017 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 PCDHGA5Q9Y5G8 931 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 UBIAD1Q9Y5Z9 338 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 MYH7P12883 1935 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 NFASCO94856 1347 aa4.61□□□□□ -1.67
SNHG1-220ENST00000544550 NEDD4P46934 1319 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms