RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 KLHL7Q8IXQ5 586 aa15.32■□□□□ 0.04
VPS33A-209ENST00000544349 CAVIN3Q969G5 261 aa15.32■□□□□ 0.04
VPS33A-209ENST00000544349 ANKRD36BP1Q96IX9 119 aa15.32■□□□□ 0.04
VPS33A-209ENST00000544349 ADPGKQ9BRR6 497 aa15.32■□□□□ 0.04
VPS33A-209ENST00000544349 IMPG2Q9BZV3 1241 aa15.32■□□□□ 0.04
VPS33A-209ENST00000544349 EPB41L5Q9HCM4 733 aa15.32■□□□□ 0.04
VPS33A-209ENST00000544349 TMEM59LQ9UK28 342 aa15.32■□□□□ 0.04
VPS33A-209ENST00000544349 LACTBL1A8MY62 500 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 TMCO5BA8MYB1 307 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 MEFVO15553 781 aaPredicted RBP15.31■□□□□ 0.04
VPS33A-209ENST00000544349 ASS1P00966 412 aaKnown RBP15.31■□□□□ 0.04
VPS33A-209ENST00000544349 TNNC2P02585 160 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 KRT5P13647 590 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 TBXAS1P24557 533 aaPredicted RBP15.31■□□□□ 0.04
VPS33A-209ENST00000544349 HOXA11P31270 313 aaPredicted RBP15.31■□□□□ 0.04
VPS33A-209ENST00000544349 GLE1Q53GS7 698 aaKnown RBP15.31■□□□□ 0.04
VPS33A-209ENST00000544349 TAS2R14Q9NYV8 317 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 SCN10AQ9Y5Y9 1956 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 A0A0A6YYK5 440 aaPredicted RBP15.31■□□□□ 0.04
VPS33A-209ENST00000544349 ELNP15502 786 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 ACO1P21399 889 aaKnown RBP15.31■□□□□ 0.04
VPS33A-209ENST00000544349 CCND3P30281 292 aaPredicted RBP15.31■□□□□ 0.04
VPS33A-209ENST00000544349 PDE6CP51160 858 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 MYL6P60660 151 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 SLC10A6Q3KNW5 377 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 CXCL17Q6UXB2 119 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 CATSPER4Q7RTX7 472 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 TAF4BQ92750 862 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 PCDHB18PQ96TA0 734 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 SH3GL2Q99962 352 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 ASB7Q9H672 318 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 OSGEPQ9NPF4 335 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 SRRDQ9UH36 339 aa15.31■□□□□ 0.04
VPS33A-209ENST00000544349 NCANO14594 1321 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 ADAMTS4O75173 837 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 MMEP08473 750 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 TMEM253P0C7T8 217 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 EIF4BP23588 611 aaKnown RBP15.3■□□□□ 0.04
VPS33A-209ENST00000544349 FMO1Q01740 532 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 CDR2Q01850 454 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 TRPC3Q13507 836 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 SGSM1Q2NKQ1 1148 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 TTMPQ5BVD1 217 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 UMODL1Q5DID0 1318 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 LRRC31Q6UY01 552 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 NME8Q8N427 588 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 CD99L2Q8TCZ2 262 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 IFT81Q8WYA0 676 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 DDX1Q92499 740 aaKnown RBP15.3■□□□□ 0.04
VPS33A-209ENST00000544349 ISCUQ9H1K1 167 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 STXBP5LQ9Y2K9 1186 aa15.3■□□□□ 0.04
VPS33A-209ENST00000544349 NOC2LQ9Y3T9 749 aaKnown RBP15.3■□□□□ 0.04
VPS33A-209ENST00000544349 CEP104O60308 925 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 NFICP08651 508 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 GZMAP12544 262 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 PRKAR2AP13861 404 aaKnown RBP15.29■□□□□ 0.04
VPS33A-209ENST00000544349 HOXD10P28358 340 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 MAP2K2P36507 400 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 GUCY2FP51841 1108 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 SNX17Q15036 470 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 DCAF4L1Q3SXM0 396 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 JADE1Q6IE81 842 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 SLFN11Q7Z7L1 901 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 IFT20Q8IY31 132 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 ARL8AQ96BM9 186 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 ACAP3Q96P50 834 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 AP1M1Q9BXS5 423 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 XPNPEP3Q9NQH7 507 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 GTF2IRD1Q9UHL9 959 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 MROH7Q68CQ1 1323 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 ANKRD62A6NC57 917 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 GOLGA6CA6NDK9 693 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 CLSTN1O94985 981 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 GOLGA6DP0CG33 693 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 GRM5P41594 1212 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 BPIFB4P59827 614 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 IFI16Q16666 785 aaKnown RBP15.29■□□□□ 0.04
VPS33A-209ENST00000544349 NBPF20Q3BBV1 942 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 TAF2Q6P1X5 1199 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 NOTUMQ6P988 496 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 SLC27A1Q6PCB7 646 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 LEKR1Q6ZMV7 388 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 TMEM40Q8WWA1 233 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 ARHGEF26Q96DR7 871 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 ZIM3Q96PE6 472 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 GOLGA6AQ9NYA3 693 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 CNTN6Q9UQ52 1028 aa15.29■□□□□ 0.04
VPS33A-209ENST00000544349 CITO14578 2027 aa15.28■□□□□ 0.04
VPS33A-209ENST00000544349 CES2O00748 559 aa15.28■□□□□ 0.04
VPS33A-209ENST00000544349 RTN2O75298 545 aa15.28■□□□□ 0.04
VPS33A-209ENST00000544349 NPTXRO95502 500 aa15.28■□□□□ 0.04
VPS33A-209ENST00000544349 ABCB4P21439 1286 aa15.28■□□□□ 0.04
VPS33A-209ENST00000544349 ECHS1P30084 290 aa15.28■□□□□ 0.04
VPS33A-209ENST00000544349 CRYBB1P53674 252 aaPredicted RBP15.28■□□□□ 0.04
VPS33A-209ENST00000544349 PAK2Q13177 524 aa15.28■□□□□ 0.04
VPS33A-209ENST00000544349 PEX26Q7Z412 305 aa15.28■□□□□ 0.04
VPS33A-209ENST00000544349 APBB1IPQ7Z5R6 666 aaPredicted RBP15.28■□□□□ 0.04
VPS33A-209ENST00000544349 NT5DC3Q86UY8 548 aa15.28■□□□□ 0.04
VPS33A-209ENST00000544349 UBR7Q8N806 425 aa15.28■□□□□ 0.04
VPS33A-209ENST00000544349 KLHDC9Q8NEP7 349 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms