RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 DGAT1O75907 488 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 SNAI1O95863 264 aaPredicted RBP15.97■□□□□ 0.15
CHFR-223ENST00000544268 SHBGP04278 402 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 MYZAPP0CAP1 466 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 DLATP10515 647 aaKnown RBP15.97■□□□□ 0.15
CHFR-223ENST00000544268 COMTP21964 271 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 GTF2BQ00403 316 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 PPP1R7Q15435 360 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 TTC27Q6P3X3 843 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 KLHL23Q8NBE8 558 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 UHMK1Q8TAS1 419 aaKnown RBP15.97■□□□□ 0.15
CHFR-223ENST00000544268 NPLOC4Q8TAT6 608 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 KATNBL1Q9H079 304 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 NOCTQ9UK39 431 aaKnown RBP15.97■□□□□ 0.15
CHFR-223ENST00000544268 LIN7AO14910 233 aaPredicted RBP15.97■□□□□ 0.15
CHFR-223ENST00000544268 ATP2C2O75185 946 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 MAPTP10636 758 aaKnown RBP15.97■□□□□ 0.15
CHFR-223ENST00000544268 ANXA13P27216 316 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 WNT7BP56706 349 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 BIRC3Q13489 604 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 CUL1Q13616 776 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 FAM160B1Q5W0V3 765 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 SMC1BQ8NDV3 1235 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 TMEM161BQ8NDZ6 487 aa15.97■□□□□ 0.15
CHFR-223ENST00000544268 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.97■□□□□ 0.15
CHFR-223ENST00000544268 DIS3Q9Y2L1 958 aaKnown RBP15.97■□□□□ 0.15
CHFR-223ENST00000544268 DENND3A2RUS2 1198 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 PYGMP11217 842 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 CNGA1P29973 690 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 FMO1Q01740 532 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 GRM1Q13255 1194 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 MAMDC4Q6UXC1 1216 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 SPDYE1Q8NFV5 336 aaPredicted RBP15.96■□□□□ 0.15
CHFR-223ENST00000544268 KIFAP3Q92845 792 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 ZBTB10Q96DT7 871 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 TMEM206Q9H813 350 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 VTA1Q9NP79 307 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 TBX20Q9UMR3 447 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 SLC15A5A6NIM6 579 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 CCDC188H7C350 402 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 AP1G2O75843 785 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 GSTA1P08263 222 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 MARK3P27448 753 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 KCNJ1P48048 391 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 PTENP60484 403 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 DR1Q01658 176 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 SF3A3Q12874 501 aaKnown RBP eCLIP15.96■□□□□ 0.152e-6■■■■□ 26.3
CHFR-223ENST00000544268 C17orf99Q6UX52 265 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 MCPH1Q8NEM0 835 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 RAPGEF5Q92565 580 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 NIFKQ9BYG3 293 aaKnown RBP15.96■□□□□ 0.15
CHFR-223ENST00000544268 AZI2Q9H6S1 392 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 PTPN22Q9Y2R2 807 aa15.96■□□□□ 0.15
CHFR-223ENST00000544268 CCT8L1PA6NM43 557 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 ENO4A6NNW6 628 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 ADCYAP1R1P41586 468 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 POLGP54098 1239 aaPredicted RBP15.95■□□□□ 0.14
CHFR-223ENST00000544268 PLTPP55058 493 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 NCKAP1LP55160 1127 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 ARHGAP1Q07960 439 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 DMP1Q13316 513 aaPredicted RBP15.95■□□□□ 0.14
CHFR-223ENST00000544268 EMC2Q15006 297 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 PRELID2Q8N945 189 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 TINF2Q9BSI4 451 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 EPB41L4BQ9H329 900 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 UTP11Q9Y3A2 253 aaKnown RBP15.95■□□□□ 0.14
CHFR-223ENST00000544268 SMIM23A6NLE4 172 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 LGR5O75473 907 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 MORN1Q5T089 497 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 RUFY4Q6ZNE9 571 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 ARMCX6Q7L4S7 300 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 CPLX4Q7Z7G2 160 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 FAM71AQ8IYT1 594 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 CCDC63Q8NA47 563 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 FBXO25Q8TCJ0 367 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 HELQQ8TDG4 1101 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 SLITRK6Q9H5Y7 841 aa15.95■□□□□ 0.14
CHFR-223ENST00000544268 DHX33Q9H6R0 707 aaKnown RBP15.95■□□□□ 0.14
CHFR-223ENST00000544268 NOP53Q9NZM5 478 aaKnown RBP15.95■□□□□ 0.14
CHFR-223ENST00000544268 NOVA2Q9UNW9 492 aaKnown RBP15.95■□□□□ 0.14
CHFR-223ENST00000544268 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.94■□□□□ 0.14
CHFR-223ENST00000544268 TMEM88BA6NKF7 163 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 RPS6KA3P51812 740 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 PPP2R2AP63151 447 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 CRHR2Q13324 411 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 ALCAMQ13740 583 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 TARBP2Q15633 366 aaKnown RBP15.94■□□□□ 0.14
CHFR-223ENST00000544268 JAMLQ86YT9 394 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 TMEM143Q96AN5 459 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 NUP85Q9BW27 656 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 POLR3FQ9H1D9 316 aaPredicted RBP15.94■□□□□ 0.14
CHFR-223ENST00000544268 CARD9Q9H257 536 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 ST6GALNAC4Q9H4F1 302 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 NRBP2Q9NSY0 501 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 RBM47A0AV96 593 aaKnown RBP15.94■□□□□ 0.14
CHFR-223ENST00000544268 CFAP73A6NFT4 308 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 DRD4P21917 467 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 GPC5P78333 572 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 SREBF2Q12772 1141 aa15.94■□□□□ 0.14
CHFR-223ENST00000544268 ZDHHC24Q6UX98 284 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms