RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 NFYCQ13952 458 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 KRT72Q14CN4 511 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 DGKKQ5KSL6 1271 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 EMC10Q5UCC4 262 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 GGT6Q6P531 493 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 GPR135Q8IZ08 494 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 OR6B3Q8NGW1 331 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 MSLNLQ96KJ4 702 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-207ENST00000544052 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-207ENST00000544052 GNL3LQ9NVN8 582 aaKnown RBP4.5□□□□□ -1.69
SCFD1-207ENST00000544052 FBXO34Q9NWN3 711 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 GAPVD1Q14C86 1478 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 SHROOM2Q13796 1616 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 A0A1W2PRX2 142 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 HOXA3O43365 443 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-207ENST00000544052 GNAI3P08754 354 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 PSMC1P62191 440 aaKnown RBP4.5□□□□□ -1.69
SCFD1-207ENST00000544052 GNAI1P63096 354 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 CAP1Q01518 475 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 DUSP8Q13202 625 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 KIF22Q14807 665 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 ATP2B3Q16720 1220 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 ARL13BQ3SXY8 428 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 ZNF568Q3ZCX4 644 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 ZNF385BQ569K4 471 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 SEM1Q6ZVN7 128 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 LINC01356Q8N9X3 169 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 KBTBD7Q8WVZ9 684 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 SUCLG2Q96I99 432 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 HERPUD2Q9BSE4 406 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 BRIP1Q9BX63 1249 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 C12orf65Q9H3J6 166 aaKnown RBP4.5□□□□□ -1.69
SCFD1-207ENST00000544052 GSTO2Q9H4Y5 243 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 BRD9Q9H8M2 597 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 LUZP4Q9P127 313 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 ZDHHC8Q9ULC8 765 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 PADI4Q9UM07 663 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 AGAP1Q9UPQ3 857 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 PCDHGB3Q9Y5G1 929 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 SLC4A7Q9Y6M7 1214 aa4.5□□□□□ -1.69
SCFD1-207ENST00000544052 A0A087WV62 115 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 A0A1W2PPC4 97 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 FOXN3O00409 490 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-207ENST00000544052 TBC1D4O60343 1298 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 MTHFD1P11586 935 aaKnown RBP4.49□□□□□ -1.69
SCFD1-207ENST00000544052 CHKAP35790 457 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 TNFAIP2Q03169 654 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 PTH1RQ03431 593 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 RAPGEF1Q13905 1077 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 ELF2Q15723 593 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 UTP14CQ5TAP6 766 aaKnown RBP4.49□□□□□ -1.69
SCFD1-207ENST00000544052 ZNF783Q6ZMS7 281 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 APBB1IPQ7Z5R6 666 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-207ENST00000544052 MICU3Q86XE3 530 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 SHCBP1Q8NEM2 672 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 NMD3Q96D46 503 aaKnown RBP4.49□□□□□ -1.69
SCFD1-207ENST00000544052 PACSIN1Q9BY11 444 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 DPH1Q9BZG8 443 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 RFXAPO00287 272 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 CDC14BO60729 498 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 SLC43A1O75387 559 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 DNAJB5O75953 348 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 HSPA7P48741 367 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 RAC3P60763 192 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 KCNA10Q16322 511 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 CSRP2Q16527 193 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 SLC35G1Q2M3R5 365 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 CRB2Q5IJ48 1285 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 ATP11CQ8NB49 1132 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 BRI3BPQ8WY22 251 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 C18orf8Q96DM3 657 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 TMEM176AQ96HP8 235 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 TCF25Q9BQ70 676 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 SELENOOQ9BVL4 669 aa4.49□□□□□ -1.69
SCFD1-207ENST00000544052 LSM14BQ9BX40 385 aaKnown RBP4.49□□□□□ -1.69
SCFD1-207ENST00000544052 MRPS18AQ9NVS2 196 aaKnown RBP4.49□□□□□ -1.69
SCFD1-207ENST00000544052 CDHR4A6H8M9 788 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 TRIM43BA6NCK2 446 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 TBKBP1A7MCY6 615 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 ZNF785A8K8V0 405 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 NPIPB6E9PJ23 425 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 UNC5CO95185 931 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 CNOT4O95628 575 aaKnown RBP4.48□□□□□ -1.69
SCFD1-207ENST00000544052 TYRP1P17643 537 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 FGFR2P21802 821 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 SLC6A2P23975 617 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 CFPP27918 469 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 PPM1FP49593 454 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-207ENST00000544052 SLURP1P55000 103 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 CLRN1P58418 232 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 UBXN2BQ14CS0 331 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 MPEG1Q2M385 716 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 TMEM95Q3KNT9 176 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 RRAGBQ5VZM2 374 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 SYTL1Q8IYJ3 562 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 MPP5Q8N3R9 675 aa4.48□□□□□ -1.69
SCFD1-207ENST00000544052 NKAPQ8N5F7 415 aaKnown RBP4.48□□□□□ -1.69
SCFD1-207ENST00000544052 SLC15A4Q8N697 577 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms