RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 TRIM42Q8IWZ5 723 aa13.64□□□□□ -0.23
TUBGCP2-210ENST00000543663 SIX6OS1Q8N1H7 587 aa13.64□□□□□ -0.23
TUBGCP2-210ENST00000543663 GPD1LQ8N335 351 aa13.64□□□□□ -0.23
TUBGCP2-210ENST00000543663 SLC5A5Q92911 643 aa13.64□□□□□ -0.23
TUBGCP2-210ENST00000543663 VCPKMTQ9H867 229 aa13.64□□□□□ -0.23
TUBGCP2-210ENST00000543663 DLGAP2Q9P1A6 1054 aa13.64□□□□□ -0.23
TUBGCP2-210ENST00000543663 ANGPTL2Q9UKU9 493 aa13.64□□□□□ -0.23
TUBGCP2-210ENST00000543663 ZNRF3Q9ULT6 936 aa13.64□□□□□ -0.23
TUBGCP2-210ENST00000543663 AP1B1Q10567 949 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 KDM7AQ6ZMT4 941 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 PDZD4Q76G19 769 aaPredicted RBP13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 CATSPER4Q7RTX7 472 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 DEFB129Q9H1M3 183 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 PHLPP1O60346 1717 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 M0QZ92 97 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 MAP2K7O14733 419 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 SDC4P31431 198 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 CYTH1Q15438 398 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 NBPF12Q5TAG4 269 aaPredicted RBP13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 TRIM67Q6ZTA4 783 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 C4orf32Q8N8J7 132 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 CDC26Q8NHZ8 85 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 CDHR1Q96JP9 859 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 SUDS3Q9H7L9 328 aaPredicted RBP13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 KCNH7Q9NS40 1196 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 B2RBV5 119 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 SYF2O95926 243 aaKnown RBP13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 RBP3P10745 1247 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 RRM1P23921 792 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 PPATQ06203 517 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 SLFN12LQ6IEE8 588 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 RBBP8NLQ8NC74 664 aaPredicted RBP13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 RPS6KC1Q96S38 1066 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 PCMTD2Q9NV79 361 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 SUCLA2Q9P2R7 463 aaPredicted RBP13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 DDX20Q9UHI6 824 aaKnown RBP13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 CFAP73A6NFT4 308 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 GJB6O95452 261 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 KRT4P19013 534 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 GMPSP49915 693 aaPredicted RBP13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 THOC5Q13769 683 aaKnown RBP13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 GIT2Q14161 759 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 SLC47A2Q86VL8 602 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 LRRC71Q8N4P6 559 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 ARMC2Q8NEN0 867 aa13.63□□□□□ -0.23
TUBGCP2-210ENST00000543663 H3BRJ5 948 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 DGKIO75912 1065 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 ANP32DO95626 131 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 HLA-DRAP01903 254 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 KRT76Q01546 638 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 ALCAMQ13740 583 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 TFDP2Q14188 446 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 PRPSAP1Q14558 356 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 MROH9Q5TGP6 573 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 PID1Q7Z2X4 250 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 GABPB2Q8TAK5 448 aaPredicted RBP13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 NSUN6Q8TEA1 469 aaKnown RBP13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 PSPC1Q8WXF1 523 aaKnown RBP13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 KAT5Q92993 513 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 TSSK1BQ9BXA7 367 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 CARD9Q9H257 536 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 TMBIM4Q9HC24 238 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 VCX3AQ9NNX9 186 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 FAM49BQ9NUQ9 324 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 NDE1Q9NXR1 346 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 PFASO15067 1338 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 ZCCHC18P0CG32 403 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 CUL3Q13618 768 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 STAT4Q14765 748 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 COBLL1Q53SF7 1204 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 RASSF3Q86WH2 238 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 ARID3BQ8IVW6 561 aaPredicted RBP13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 FAM71DQ8N9W8 422 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 ATP8B4Q8TF62 1192 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 FGD4Q96M96 766 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 CDC42EP4Q9H3Q1 356 aaKnown RBP13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 IP6K2Q9UHH9 426 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 SPDYE2BA6NHP3 402 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 SEC24DO94855 1032 aaPredicted RBP13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 SPDYE6P0CI01 402 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 PDGFRAP16234 1089 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 TMEM62Q0P6H9 643 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 NCOA4Q13772 614 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 TTMPQ5BVD1 217 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 DLK2Q6UY11 383 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 EPS15L1Q9UBC2 864 aa13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 HERC5Q9UII4 1024 aaKnown RBP13.62□□□□□ -0.23
TUBGCP2-210ENST00000543663 APOEP02649 317 aa13.61□□□□□ -0.23
TUBGCP2-210ENST00000543663 CALB1P05937 261 aa13.61□□□□□ -0.23
TUBGCP2-210ENST00000543663 PDGFRBP09619 1106 aa13.61□□□□□ -0.23
TUBGCP2-210ENST00000543663 ITIH2P19823 946 aa13.61□□□□□ -0.23
TUBGCP2-210ENST00000543663 BRD2P25440 801 aaKnown RBP13.61□□□□□ -0.23
TUBGCP2-210ENST00000543663 HOXA10P31260 410 aaPredicted RBP13.61□□□□□ -0.23
TUBGCP2-210ENST00000543663 GCLCP48506 637 aaPredicted RBP13.61□□□□□ -0.23
TUBGCP2-210ENST00000543663 JAK3P52333 1124 aa13.61□□□□□ -0.23
TUBGCP2-210ENST00000543663 STX1BP61266 288 aa13.61□□□□□ -0.23
TUBGCP2-210ENST00000543663 MEI1Q5TIA1 1274 aa13.61□□□□□ -0.23
TUBGCP2-210ENST00000543663 LRIG3Q6UXM1 1119 aa13.61□□□□□ -0.23
TUBGCP2-210ENST00000543663 UBA3Q8TBC4 463 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms