RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 PTP4A2Q12974 167 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 KCTD2Q14681 263 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 PLCB4Q15147 1175 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 KRT71Q3SY84 523 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 SGO2Q562F6 1265 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 PPP1R2P3Q6NXS1 205 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 SLCO2A1Q92959 643 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 DDX27Q96GQ7 796 aaKnown RBP14.81□□□□□ -0.04
MSH2-206ENST00000543555 MMP19Q99542 508 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 MTMR12Q9C0I1 747 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 RABEP2Q9H5N1 569 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 ZEB2O60315 1214 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 C1QBPQ07021 282 aaKnown RBP14.81□□□□□ -0.04
MSH2-206ENST00000543555 MAMLD1Q13495 774 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 PLEKHA7Q6IQ23 1121 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 MMS22LQ6ZRQ5 1243 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 FBXO16Q8IX29 292 aaPredicted RBP14.81□□□□□ -0.04
MSH2-206ENST00000543555 MAIP1Q8WWC4 291 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 C1orf54Q8WWF1 131 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 C2orf40Q9H1Z8 148 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 BCCIPQ9P287 314 aaKnown RBP eCLIP14.81□□□□□ -0.04
MSH2-206ENST00000543555 LCMT1Q9UIC8 334 aa14.81□□□□□ -0.04
MSH2-206ENST00000543555 CPSF3Q9UKF6 684 aaKnown RBP14.81□□□□□ -0.04
MSH2-206ENST00000543555 CCT5P48643 541 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 PPIL2Q13356 520 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 SKIDA1Q1XH10 827 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 LDLRAD1Q5T700 205 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 DHX37Q8IY37 1157 aaKnown RBP14.8□□□□□ -0.04
MSH2-206ENST00000543555 ZNF606Q8WXB4 792 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 ART4Q93070 314 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 SPATA33Q96N06 139 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 SCINQ9Y6U3 715 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 HTTP42858 3142 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 TULP2O00295 520 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 MOGSQ13724 837 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 SURF1Q15526 300 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 CCDC62Q6P9F0 684 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.8□□□□□ -0.04
MSH2-206ENST00000543555 FAM212AQ96EL1 285 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 ZIC5Q96T25 663 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 HERPUD2Q9BSE4 406 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 LRRC4CQ9HCJ2 640 aa14.8□□□□□ -0.04
MSH2-206ENST00000543555 ABT1Q9ULW3 272 aaKnown RBP14.8□□□□□ -0.04
MSH2-206ENST00000543555 PSTPIP1O43586 416 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 ZNF157P51786 506 aaPredicted RBP14.79□□□□□ -0.04
MSH2-206ENST00000543555 MYL6P60660 151 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 PPP1R7Q15435 360 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 DUOXA2Q1HG44 320 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 WDR78Q5VTH9 848 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 DAB2IPQ5VWQ8 1189 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 RHPN2Q8IUC4 686 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 JPH2Q9BR39 696 aaPredicted RBP14.79□□□□□ -0.04
MSH2-206ENST00000543555 FAM129AQ9BZQ8 928 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 NOVA2Q9UNW9 492 aaKnown RBP14.79□□□□□ -0.04
MSH2-206ENST00000543555 PROZP22891 400 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 DENND2CQ68D51 928 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 RHOT1Q8IXI2 618 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 TRAPPC12Q8WVT3 735 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 RNF25Q96BH1 459 aaPredicted RBP14.79□□□□□ -0.04
MSH2-206ENST00000543555 NIF3L1Q9GZT8 377 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 CHST7Q9NS84 486 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 SLC12A6Q9UHW9 1150 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 O00370 1275 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 TLR3O15455 904 aaKnown RBP14.79□□□□□ -0.04
MSH2-206ENST00000543555 SHBGP04278 402 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 MMP8P22894 467 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 SLC26A2P50443 739 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 KRT17Q04695 432 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 SGSM1Q2NKQ1 1148 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 MPZL3Q6UWV2 235 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 TSHZ1Q6ZSZ6 1077 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 HOOK3Q86VS8 718 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 COPS5Q92905 334 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 EPN3Q9H201 632 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 PARVAQ9NVD7 372 aa14.79□□□□□ -0.04
MSH2-206ENST00000543555 ACKR2O00590 384 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 HOXC6P09630 235 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 OSBPP22059 807 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 YY1P25490 414 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 TAS2R40P59535 323 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 SNX1Q13596 522 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 PTGISQ16647 500 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 FEZF2Q8TBJ5 459 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 ATG4AQ8WYN0 398 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 NLRP4Q96MN2 994 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 SMARCAD1Q9H4L7 1026 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 MROH8Q9H579 483 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 PTPRHQ9HD43 1115 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 MYO1CO00159 1063 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 NDUFAB1O14561 156 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 GJB1P08034 283 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 TXNP10599 105 aaKnown RBP14.78□□□□□ -0.04
MSH2-206ENST00000543555 CD58P19256 250 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 MAN1A1P33908 653 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 MAGOHP61326 146 aaKnown RBP14.78□□□□□ -0.04
MSH2-206ENST00000543555 PPP2R2AP63151 447 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 CALCOCO2Q13137 446 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 TFDP1Q14186 410 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 SLMAPQ14BN4 828 aa14.78□□□□□ -0.04
MSH2-206ENST00000543555 ODF2Q5BJF6 829 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms