RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 MYPNQ86TC9 1320 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 KDM3AQ9Y4C1 1321 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 CDK4P11802 303 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 MARK3P27448 753 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 ECHS1P30084 290 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 TSPY1Q01534 308 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 DLGAP5Q15398 846 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 C1orf228Q6PIY5 440 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 B3GNT6Q6ZMB0 384 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 RBM44Q6ZP01 1051 aaKnown RBP11.93□□□□□ -0.5
CDH4-201ENST00000543233 ZNF662Q6ZS27 426 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 ECHDC2Q86YB7 292 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 KBTBD2Q8IY47 623 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 USP6NLQ92738 828 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 TGS1Q96RS0 853 aaKnown RBP11.93□□□□□ -0.5
CDH4-201ENST00000543233 FMO2Q99518 471 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 IDI2Q9BXS1 227 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 RNF14Q9UBS8 474 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 LZTS1Q9Y250 596 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 FADS3Q9Y5Q0 445 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.93□□□□□ -0.5
CDH4-201ENST00000543233 SIGLEC16A6NMB1 481 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 STAMBPO95630 424 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 KCNA2P16389 499 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 PPP1R2P41236 205 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 CASP4P49662 377 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 EIF2B2P49770 351 aaKnown RBP11.93□□□□□ -0.5
CDH4-201ENST00000543233 STAT2P52630 851 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 PPP1R2P3Q6NXS1 205 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 TAOK1Q7L7X3 1001 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 EPS8L3Q8TE67 593 aaKnown RBP11.93□□□□□ -0.5
CDH4-201ENST00000543233 MCUR1Q96AQ8 359 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 LRRC37BQ96QE4 947 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 CELF4Q9BZC1 486 aaKnown RBP11.93□□□□□ -0.5
CDH4-201ENST00000543233 CEP44Q9C0F1 390 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 ADAM7Q9H2U9 754 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 TPK1Q9H3S4 243 aa11.93□□□□□ -0.5
CDH4-201ENST00000543233 A0A1W2PQ67 120 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 TBX10O75333 385 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 TBCAO75347 108 aaKnown RBP11.92□□□□□ -0.5
CDH4-201ENST00000543233 SLC9A1P19634 815 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 NMT1P30419 496 aaKnown RBP11.92□□□□□ -0.5
CDH4-201ENST00000543233 STX2P32856 288 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 SKIV2L2P42285 1042 aaKnown RBP11.92□□□□□ -0.5
CDH4-201ENST00000543233 ORC2Q13416 577 aaPredicted RBP11.92□□□□□ -0.5
CDH4-201ENST00000543233 CNGA2Q16280 664 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 LRRC36Q1X8D7 754 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 CCDC153Q494R4 210 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 TATDN1Q6P1N9 297 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 DSTYKQ6XUX3 929 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 SCYL3Q8IZE3 742 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 FAIMQ9NVQ4 179 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 PTTG2Q9NZH5 202 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 SERPINA10Q9UK55 444 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 WASF2Q9Y6W5 498 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 GJB6O95452 261 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 SPATA31C1P0DKV0 1188 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 S100A1P23297 94 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 CDR2Q01850 454 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 KCNH2Q12809 1159 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 GJB7Q6PEY0 223 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 RAVER1Q8IY67 606 aaKnown RBP11.92□□□□□ -0.5
CDH4-201ENST00000543233 SLFN12Q8IYM2 578 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 USP38Q8NB14 1042 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 ETNPPLQ8TBG4 499 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 FNDC8Q8TC99 324 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 U2AF1L4Q8WU68 220 aaKnown RBP11.92□□□□□ -0.5
CDH4-201ENST00000543233 MAELQ96JY0 434 aaKnown RBP11.92□□□□□ -0.5
CDH4-201ENST00000543233 HNRNPABQ99729 332 aaKnown RBP11.92□□□□□ -0.5
CDH4-201ENST00000543233 EIF2AK1Q9BQI3 630 aaKnown RBP11.92□□□□□ -0.5
CDH4-201ENST00000543233 HEPHQ9BQS7 1158 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 PACSIN1Q9BY11 444 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 IL1RAPL1Q9NZN1 696 aa11.92□□□□□ -0.5
CDH4-201ENST00000543233 FAM32AQ9Y421 112 aaKnown RBP11.92□□□□□ -0.5
CDH4-201ENST00000543233 TTI1O43156 1089 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 OAS1P00973 400 aaKnown RBP11.91□□□□□ -0.5
CDH4-201ENST00000543233 SLC12A3P55017 1021 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 MGAT5Q09328 741 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 PDCD4Q53EL6 469 aaKnown RBP11.91□□□□□ -0.5
CDH4-201ENST00000543233 METTL21CQ5VZV1 264 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 MYCT1Q8N699 235 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 SCAIQ8N9R8 606 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 GIPC3Q8TF64 312 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 GAB3Q8WWW8 586 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 BAP1Q92560 729 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 LENG9Q96B70 501 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 SLC39A3Q9BRY0 314 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 UTP11Q9Y3A2 253 aaKnown RBP11.91□□□□□ -0.5
CDH4-201ENST00000543233 SCN9AQ15858 1988 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 SERPINB7O75635 380 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 ATP5HO75947 161 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 S100BP04271 92 aaPredicted RBP11.91□□□□□ -0.5
CDH4-201ENST00000543233 PABPC4LP0CB38 370 aaKnown RBP11.91□□□□□ -0.5
CDH4-201ENST00000543233 LMNB1P20700 586 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 DSG1Q02413 1049 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 AP1B1Q10567 949 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 CAMK2BQ13554 666 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 GIT2Q14161 759 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 ACAP1Q15027 740 aa11.91□□□□□ -0.5
CDH4-201ENST00000543233 FXNQ16595 210 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms