RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 ATG4AQ8WYN0 398 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 N4BP2L2Q92802 583 aaPredicted RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 FAM212AQ96EL1 285 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 TAAR1Q96RJ0 339 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 SMC6Q96SB8 1091 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 GMLQ99445 158 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 PITPNM3Q9BZ71 974 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 RAVER2Q9HCJ3 691 aaKnown RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 TOPORSQ9NS56 1045 aaPredicted RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 FETUBQ9UGM5 382 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 NAALADL1Q9UQQ1 740 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 DRG1Q9Y295 367 aaKnown RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 NEU2Q9Y3R4 380 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 PCDHB4Q9Y5E5 795 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 UMODL1Q5DID0 1318 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 TLR3O15455 904 aaKnown RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 MAGEB2O15479 319 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 CCNE2O96020 404 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 PIGRP01833 764 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 NOMO3P69849 1222 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 RNASELQ05823 741 aaKnown RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 NFX1Q12986 1120 aaKnown RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 SPP2Q13103 211 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 XKR3Q5GH77 459 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 ZFYVE27Q5T4F4 411 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 MIS18BP1Q6P0N0 1132 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 SLC39A4Q6P5W5 647 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 CENPUQ71F23 418 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 ANKS1BQ7Z6G8 1248 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 CPA5Q8WXQ8 436 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 C11orf70Q9BRQ4 267 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 ZNF518BQ9C0D4 1074 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 EBF2Q9HAK2 575 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 SSU72Q9NP77 194 aaKnown RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 ACP6Q9NPH0 428 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.19□□□□□ -1.269e-10■■■■■ 86.9
NKRF-204ENST00000542113 GABBR1Q9UBS5 961 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 PRKAG3Q9UGI9 489 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 AGO2Q9UKV8 859 aaKnown RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 CEP83Q9Y592 693 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 STYXL1Q9Y6J8 313 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 USH1CQ9Y6N9 552 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 TP73O15350 636 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 CCNB1P14635 433 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 OAZ1P54368 228 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 CRYMQ14894 314 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 E2F5Q15329 346 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 TMED2Q15363 201 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 TRIP13Q15645 432 aaPredicted RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 P3H1Q32P28 736 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 FYB2Q5VWT5 728 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 FAM228AQ86W67 206 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 AGGF1Q8N302 714 aaeCLIP7.19□□□□□ -1.26
NKRF-204ENST00000542113 GDAP1Q8TB36 358 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 NSUN6Q8TEA1 469 aaKnown RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 POP1Q99575 1024 aaKnown RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 CGRRF1Q99675 332 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 POLR3FQ9H1D9 316 aaPredicted RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 ARHGEF3Q9NR81 526 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 HOMER2Q9NSB8 354 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 SEPT9Q9UHD8 586 aaPredicted RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 RPL26L1Q9UNX3 145 aaKnown RBP7.19□□□□□ -1.26
NKRF-204ENST00000542113 CNTN6Q9UQ52 1028 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 ZNF148Q9UQR1 794 aa7.19□□□□□ -1.26
NKRF-204ENST00000542113 IGF2BP3O00425 579 aaKnown RBP eCLIP7.18□□□□□ -1.26
NKRF-204ENST00000542113 KLRC2P26717 231 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 VPS41P49754 854 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 YWHAEP62258 255 aaKnown RBP7.18□□□□□ -1.26
NKRF-204ENST00000542113 MAMLD1Q13495 774 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 PIGHQ14442 188 aaPredicted RBP7.18□□□□□ -1.26
NKRF-204ENST00000542113 SURF1Q15526 300 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 VSIG10LQ86VR7 867 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 TTC13Q8NBP0 860 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 RBBP8NLQ8NC74 664 aaPredicted RBP7.18□□□□□ -1.26
NKRF-204ENST00000542113 ZNF398Q8TD17 642 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 LRRC8CQ8TDW0 803 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 KIFC3Q9BVG8 833 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 TMEM39BQ9GZU3 492 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 PCDH9Q9HC56 1237 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 JPH1Q9HDC5 661 aaPredicted RBP7.18□□□□□ -1.26
NKRF-204ENST00000542113 SAYSD1Q9NPB0 183 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 CYP26B1Q9NR63 512 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 PSMC3IPQ9P2W1 217 aaPredicted RBP7.18□□□□□ -1.26
NKRF-204ENST00000542113 EFR3BQ9Y2G0 817 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 LIASO43766 372 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 UNC5CO95185 931 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 LUC7L3O95232 432 aaKnown RBP7.18□□□□□ -1.26
NKRF-204ENST00000542113 C4BPAP04003 597 aaKnown RBP7.18□□□□□ -1.26
NKRF-204ENST00000542113 KRT1P04264 644 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 TSHRP16473 764 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 KRT15P19012 456 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 MSH2P43246 934 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 NAMPTP43490 491 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 POLGP54098 1239 aaPredicted RBP7.18□□□□□ -1.26
NKRF-204ENST00000542113 CLNS1AP54105 237 aaKnown RBP7.18□□□□□ -1.26
NKRF-204ENST00000542113 GRM1Q13255 1194 aa7.18□□□□□ -1.26
NKRF-204ENST00000542113 ZKSCAN8Q15776 578 aaPredicted RBP7.18□□□□□ -1.26
NKRF-204ENST00000542113 SEPT7Q16181 437 aaKnown RBP7.18□□□□□ -1.26
NKRF-204ENST00000542113 PARP6Q2NL67 630 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms