RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 NUP133Q8WUM0 1156 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 NEU4Q8WWR8 484 aaPredicted RBP4.07□□□□□ -1.76
USP28-210ENST00000542033 SLC35A4Q96G79 324 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 ACO2Q99798 780 aaKnown RBP4.07□□□□□ -1.76
USP28-210ENST00000542033 PRRX2Q99811 253 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 BRD9Q9H8M2 597 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 SLAMF7Q9NQ25 335 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 AKIP1Q9NQ31 210 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 CFAP97Q9P2B7 532 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 CHST2Q9Y4C5 530 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 FPGT-TNNI3KV9GXZ4 949 aa4.07□□□□□ -1.76
USP28-210ENST00000542033 A0A1B0GTW7 788 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 TMEM191CA6NGB0 347 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 NT5C1B-RDH14C9J2C7 533 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 ERN1O75460 977 aaKnown RBP4.06□□□□□ -1.76
USP28-210ENST00000542033 EIF3JO75822 258 aaKnown RBP4.06□□□□□ -1.76
USP28-210ENST00000542033 NCR1O76036 304 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 UBXN7O94888 489 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 ABHD16AO95870 558 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 ANXA1P04083 346 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 KRT18P05783 430 aaKnown RBP4.06□□□□□ -1.76
USP28-210ENST00000542033 MYBP10242 640 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 PRDX5P30044 214 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 SLC6A4P31645 630 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 HMGA2P52926 109 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 PTTG1IPP53801 180 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 RHBDL3P58872 404 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 TGFB2P61812 414 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 PTPAQ15257 358 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 SPDYE7PQ495Y7 208 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 PPP4R4Q6NUP7 873 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 KCNV1Q6PIU1 500 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 C14orf80Q86SX3 495 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 MAPKAPK5Q8IW41 473 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 EXOC8Q8IYI6 725 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 ZBTB34Q8NCN2 500 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 PPP1R35Q8TAP8 253 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 PROKR1Q8TCW9 393 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 BRIX1Q8TDN6 353 aaKnown RBP4.06□□□□□ -1.76
USP28-210ENST00000542033 TNPO1Q92973 898 aaKnown RBP4.06□□□□□ -1.76
USP28-210ENST00000542033 MYEOVQ96EZ4 313 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 PNKPQ96T60 521 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 NEU1Q99519 415 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 IMPG2Q9BZV3 1241 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 ZNF768Q9H5H4 540 aaKnown RBP4.06□□□□□ -1.76
USP28-210ENST00000542033 ARMT1Q9H993 441 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 SARS2Q9NP81 518 aaKnown RBP4.06□□□□□ -1.76
USP28-210ENST00000542033 CNNM1Q9NRU3 951 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 C1orf112Q9NSG2 853 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 KLHL11Q9NVR0 708 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 GPRC5BQ9NZH0 403 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 RNF181Q9P0P0 153 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 MTO1Q9Y2Z2 717 aaKnown RBP4.06□□□□□ -1.76
USP28-210ENST00000542033 PCDHA1Q9Y5I3 950 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 NOX1Q9Y5S8 564 aa4.06□□□□□ -1.76
USP28-210ENST00000542033 WDR33Q9C0J8 1336 aaKnown RBP4.05□□□□□ -1.76
USP28-210ENST00000542033 VSTM5A8MXK1 200 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 B3GALT2O43825 422 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 PRSS23O95084 383 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 NDUFA10O95299 355 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 GPANK1O95872 356 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 GNAI2P04899 355 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 GJB1P08034 283 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 FGFR4P22455 802 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 INHBCP55103 352 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 PSMC1P62191 440 aaKnown RBP4.05□□□□□ -1.76
USP28-210ENST00000542033 NOMO3P69849 1222 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 NKX6-1P78426 367 aaPredicted RBP4.05□□□□□ -1.76
USP28-210ENST00000542033 FAM189BP81408 668 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 KLF10Q13118 480 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 HDAC1Q13547 482 aaPredicted RBP4.05□□□□□ -1.76
USP28-210ENST00000542033 UBE4AQ14139 1066 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 FGL2Q14314 439 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 PLS1Q14651 629 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 NOMO2Q5JPE7 1267 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 METRNLQ641Q3 311 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 IGFL4Q6B9Z1 124 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 MRGPREQ86SM8 312 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 FAM90A1Q86YD7 464 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 PDSS2Q86YH6 399 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 SMC5Q8IY18 1101 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 SLC17A8Q8NDX2 589 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 TTC8Q8TAM2 541 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 PMM1Q92871 262 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 RUNDC1Q96C34 613 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 MARS2Q96GW9 593 aaKnown RBP4.05□□□□□ -1.76
USP28-210ENST00000542033 ZSWIM1Q9BR11 485 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 MRIQ9BWK5 157 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 C1orf43Q9BWL3 253 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 TEX101Q9BY14 249 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 FAM204AQ9H8W3 233 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 RLIMQ9NVW2 624 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 ZDHHC8Q9ULC8 765 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 CDYLQ9Y232 598 aa4.05□□□□□ -1.76
USP28-210ENST00000542033 AATKQ6ZMQ8 1374 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 ZNF785A8K8V0 405 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 FAM227AF5H4B4 570 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 TUSC2O75896 110 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 SLPIP03973 132 aa4.04□□□□□ -1.76
USP28-210ENST00000542033 CFIP05156 583 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms