RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 TRIM32Q13049 653 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 SGCGQ13326 291 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 TRIM14Q14142 442 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 STILQ15468 1287 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 FUT11Q495W5 492 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 ERFEQ4G0M1 354 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 CDONQ4KMG0 1287 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 IL23RQ5VWK5 629 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 METTL21CQ5VZV1 264 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 MAMDC2Q7Z304 686 aaPredicted RBP6.53□□□□□ -1.36
LMO3-225ENST00000541295 STARD8Q92502 1023 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 INPP5DQ92835 1189 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 RNF34Q969K3 372 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 L3MBTL3Q96JM7 780 aaPredicted RBP6.53□□□□□ -1.36
LMO3-225ENST00000541295 SH3GL2Q99962 352 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 C12orf49Q9H741 205 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 FAM204AQ9H8W3 233 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 NCOA5Q9HCD5 579 aaKnown RBP6.53□□□□□ -1.36
LMO3-225ENST00000541295 SAMD15Q9P1V8 674 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 BTBD7Q9P203 1132 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 FNIP2Q9P278 1114 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 SCOCQ9UIL1 159 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 SNX6Q9UNH7 406 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 ERVK-19Q9WJR5 959 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 SNX9Q9Y5X1 595 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 NUP98P52948 1817 aa6.53□□□□□ -1.36
LMO3-225ENST00000541295 TYW5A2RUC4 315 aaKnown RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 CIAO1O76071 339 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 CSF1RP07333 972 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 POLR2BP30876 1174 aaKnown RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 PCK1P35558 622 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 IGHMBP2P38935 993 aaKnown RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 MTIF2P46199 727 aaKnown RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 RAB15P59190 212 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 S100A12P80511 92 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 CEBPZQ03701 1054 aaKnown RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 CDC16Q13042 620 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 RASGRF1Q13972 1273 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 SCARF1Q14162 830 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 MXD4Q14582 209 aaPredicted RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 SUPT20HL1Q3ZLR7 823 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 ITPRIPL1Q6GPH6 555 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 SARM1Q6SZW1 724 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 C3orf62Q6ZUJ4 267 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 RFPL4BQ6ZWI9 263 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 CYP4V2Q6ZWL3 525 aaPredicted RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 KRT74Q7RTS7 529 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 ALDH16A1Q8IZ83 802 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 XXYLT1Q8NBI6 393 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 LEO1Q8WVC0 666 aaPredicted RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 NXPE3Q969Y0 559 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 LENG1Q96BZ8 264 aaPredicted RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 TIFAQ96CG3 184 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 IQCDQ96DY2 449 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 METTL2AQ96IZ6 378 aaKnown RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 CARD6Q9BX69 1037 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 HAUS4Q9H6D7 363 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 SH2B1Q9NRF2 756 aaPredicted RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 BAG5Q9UL15 447 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 AGAP1Q9UPQ3 857 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 FAM50BQ9Y247 325 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 DGKBQ9Y6T7 804 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 A0A1W2PQ67 120 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 DPPA5A6NC42 116 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 SFI1A8K8P3 1242 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 H0Y626 953 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 ATMINO43313 823 aaPredicted RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 IDH1O75874 414 aaKnown RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 F13A1P00488 732 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 ALDH2P05091 517 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 PDGFRAP16234 1089 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 SLC1A1P43005 524 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 ZAP70P43403 619 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 DMC1Q14565 340 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 EPHA7Q15375 998 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 KRBOX4Q5JUW0 171 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 HECTD3Q5T447 861 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 ZYG11AQ6WRX3 759 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 DBX2Q6ZNG2 339 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 KDELC2Q7Z4H8 507 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 P3H2Q8IVL5 708 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 C12orf56Q8IXR9 622 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 DNAAF3Q8N9W5 541 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 GMCL1Q96IK5 515 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 LLPHQ9BRT6 129 aaKnown RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 NTPCRQ9BSD7 190 aaKnown RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 PLA2G12BQ9BX93 195 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 MRM3Q9HC36 420 aaKnown RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 ARHGAP28Q9P2N2 729 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 ZBTB21Q9ULJ3 1066 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 DNM3Q9UQ16 869 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 STK38LQ9Y2H1 464 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 USH1CQ9Y6N9 552 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 TUBGCP6Q96RT7 1819 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 RNF113AO15541 343 aaKnown RBP6.52□□□□□ -1.37
LMO3-225ENST00000541295 TLR2O60603 784 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 NTSR2O95665 410 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 TUBBP07437 444 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 CRABP2P29373 138 aa6.52□□□□□ -1.37
LMO3-225ENST00000541295 RFC4P35249 363 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms