RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ACSL3O95573 720 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 BRAFP15056 766 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 ACADSP16219 412 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 CYP11B2P19099 503 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 ALDH3A1P30838 453 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 MGAT5Q09328 741 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 CUL3Q13618 768 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 MTFR1Q15390 333 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 GEN1Q17RS7 908 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 SGSM1Q2NKQ1 1148 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 GPATCH4Q5T3I0 446 aaKnown RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 STRIP1Q5VSL9 837 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 AADACL2Q6P093 401 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 FAM117BQ6P1L5 589 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 PODNQ7Z5L7 613 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 ECHDC2Q86YB7 292 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 RHOT2Q8IXI1 618 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 SLC30A5Q8TAD4 765 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 ART4Q93070 314 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 UTP4Q969X6 686 aaKnown RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 ZBED3Q96IU2 234 aaPredicted RBP5.54□□□□□ -1.52
PROM1-220ENST00000540805 MYLK2Q9H1R3 596 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 PCIF1Q9H4Z3 704 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 CTNNAL1Q9UBT7 734 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 MTUS1Q9ULD2 1270 aa5.54□□□□□ -1.52
PROM1-220ENST00000540805 BRWD1Q9NSI6 2320 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 POTEB3A0JP26 581 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 POTECB2RU33 542 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 USP17L15C9J2P7 530 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 USP17L13C9JLJ4 530 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 USP17L11C9JVI0 530 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 USP17L18D6R9N7 530 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 USP17L22D6RA61 530 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 USP17L17D6RBQ6 530 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 USP17L19D6RCP7 530 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 USP17L20D6RJB6 530 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 SLC16A3O15427 465 aaKnown RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 SUPT3HO75486 399 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 UBTFL6P0CB48 400 aaPredicted RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 TPBGLP0DKB5 382 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 PEX5P50542 639 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 HMGCS2P54868 508 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 TFAMQ00059 246 aaKnown RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 USP17L24Q0WX57 530 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 KNOP1Q1ED39 458 aaKnown RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 MUM1Q2TAK8 710 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 LMBRD2Q68DH5 695 aaPredicted RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 CGB2Q6NT52 195 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 TTC27Q6P3X3 843 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 CASC4Q6P4E1 433 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 USP17L6PQ6QN14 398 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 POTEBQ6S5H4 581 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 KIFAP3Q92845 792 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 ABTB1Q969K4 478 aaPredicted RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 ERP27Q96DN0 273 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 NUDCD1Q96RS6 583 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 NDNQ99608 321 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 TEKT3Q9BXF9 490 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 TUT1Q9H6E5 874 aaKnown RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 PRDM5Q9NQX1 630 aaPredicted RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 NRBP2Q9NSY0 501 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 LRFN2Q9ULH4 789 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 USP20Q9Y2K6 914 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 PTPN22Q9Y2R2 807 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 GTPBP10A4D1E9 387 aaKnown RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 MAGEA13PA6NCF6 341 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 ANKRD63C9JTQ0 380 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 PDXKO00764 312 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 ATP2A1O14983 1001 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 EIF4BP23588 611 aaKnown RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 COILP38432 576 aaPredicted RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 DBN1Q16643 649 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 ACBD5Q5T8D3 534 aaPredicted RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 ZBTB33Q86T24 672 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 SAPCD2Q86UD0 394 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 MICALL2Q8IY33 904 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.53□□□□□ -1.52
PROM1-220ENST00000540805 ASAP3Q8TDY4 903 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 ZFAND2BQ8WV99 257 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 DNAJC9Q8WXX5 260 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 INPP5DQ92835 1189 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 MKL1Q969V6 931 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 SLC35C1Q96A29 364 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 ZSWIM1Q9BR11 485 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 PITPNM3Q9BZ71 974 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 THAP2Q9H0W7 228 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 ELP3Q9H9T3 547 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 CHMP2BQ9UQN3 213 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 TDRKHQ9Y2W6 561 aaKnown RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 ALG6Q9Y672 507 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 DNAH12Q6ZR08 3092 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 APC2O95996 2303 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 CLIC2O15247 247 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 SH3BP5O60239 455 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 AKAP3O75969 853 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 GH1P01241 217 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 LMNAP02545 664 aaKnown RBP5.53□□□□□ -1.52
PROM1-220ENST00000540805 NR3C1P04150 777 aa5.53□□□□□ -1.52
PROM1-220ENST00000540805 TARSP26639 723 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 1038.7 ms