RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 SKOR1P84550 965 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 MTMR3Q13615 1198 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 AMHR2Q16671 573 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 ZDHHC24Q6UX98 284 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 ZNF606Q8WXB4 792 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 DDX27Q96GQ7 796 aaKnown RBP14.68□□□□□ -0.06
RTN3-210ENST00000540798 GRHL1Q9NZI5 618 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 PODXLO00592 558 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 ADORA2AP29274 412 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 MAN1A1P33908 653 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 ASPAP45381 313 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 LIN9Q5TKA1 542 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 WDR78Q5VTH9 848 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 EEF1DP3Q658K8 133 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 FAXDC2Q96IV6 333 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 CDT1Q9H211 546 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 RASAL2Q9UJF2 1139 aa14.68□□□□□ -0.06
RTN3-210ENST00000540798 TCRBV5S1A1TA0A578 114 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 IQCA1LA6NCM1 817 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 PDHXO00330 501 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 THAP12O43422 761 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 LSM8O95777 96 aaKnown RBP14.67□□□□□ -0.06
RTN3-210ENST00000540798 GH1P01241 217 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 CETPP11597 493 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 MMP8P22894 467 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 CDH5P33151 784 aaPredicted RBP14.67□□□□□ -0.06
RTN3-210ENST00000540798 COILP38432 576 aaPredicted RBP14.67□□□□□ -0.06
RTN3-210ENST00000540798 LLGL2Q6P1M3 1020 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 MAGOHBQ96A72 148 aaKnown RBP14.67□□□□□ -0.06
RTN3-210ENST00000540798 ZBTB10Q96DT7 871 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 NLRP4Q96MN2 994 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 DPH5Q9H2P9 285 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 MRPL47Q9HD33 250 aaKnown RBP14.67□□□□□ -0.06
RTN3-210ENST00000540798 ADAM22Q9P0K1 906 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 MTUS1Q9ULD2 1270 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 SCINQ9Y6U3 715 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 MEFVO15553 781 aaPredicted RBP14.67□□□□□ -0.06
RTN3-210ENST00000540798 IL18RAPO95256 599 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 HOXD8P13378 290 aaPredicted RBP14.67□□□□□ -0.06
RTN3-210ENST00000540798 INSRRP14616 1297 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 GBP1P32455 592 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 ZNF568Q3ZCX4 644 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 EAPPQ56P03 285 aaPredicted RBP14.67□□□□□ -0.06
RTN3-210ENST00000540798 CCDC137Q6PK04 289 aaKnown RBP14.67□□□□□ -0.06
RTN3-210ENST00000540798 ANKRD23Q86SG2 305 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 PNMA8AQ86V59 439 aaPredicted RBP14.67□□□□□ -0.06
RTN3-210ENST00000540798 PRMT7Q9NVM4 692 aaPredicted RBP14.67□□□□□ -0.06
RTN3-210ENST00000540798 PCDHGC3Q9UN70 934 aa14.67□□□□□ -0.06
RTN3-210ENST00000540798 BTBD19C9JJ37 291 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 MYO1FO00160 1098 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 PSTPIP1O43586 416 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 STRNO43815 780 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 POTEJP0CG39 1038 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 PASD1Q8IV76 773 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 C11orf70Q9BRQ4 267 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 PLVAPQ9BX97 442 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 TMBIM4Q9HC24 238 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 CISHQ9NSE2 258 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 MAGEB2O15479 319 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 HNRNPH2P55795 449 aaKnown RBP14.66□□□□□ -0.06
RTN3-210ENST00000540798 CXorf38Q8TB03 319 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 FMO2Q99518 471 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 C16orf70Q9BSU1 422 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 INO80B-WBP1J3KQ70 363 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 PHKA2P46019 1235 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 GCLCP48506 637 aaPredicted RBP14.66□□□□□ -0.06
RTN3-210ENST00000540798 GTF2A2P52657 109 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 KCTD19Q17RG1 926 aaPredicted RBP14.66□□□□□ -0.06
RTN3-210ENST00000540798 C2CD6Q53TS8 623 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 MMS22LQ6ZRQ5 1243 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 CEP120Q8N960 986 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 FAM129AQ9BZQ8 928 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 INO80BQ9C086 356 aaPredicted RBP14.66□□□□□ -0.06
RTN3-210ENST00000540798 ZNF518BQ9C0D4 1074 aa14.66□□□□□ -0.06
RTN3-210ENST00000540798 RALGAPA2Q2PPJ7 1873 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 SNAI1O95863 264 aaPredicted RBP14.65□□□□□ -0.06
RTN3-210ENST00000540798 MCF2P10911 925 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 ZNF844Q08AG5 666 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 GJC2Q5T442 439 aaPredicted RBP14.65□□□□□ -0.06
RTN3-210ENST00000540798 LRRC31Q6UY01 552 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 KDM7AQ6ZMT4 941 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 BRI3BPQ8WY22 251 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 ATP6V1G3Q96LB4 118 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 BCO2Q9BYV7 579 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 EPB41L4BQ9H329 900 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 PARVAQ9NVD7 372 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.65□□□□□ -0.06
RTN3-210ENST00000540798 HMGB1P1B2RPK0 211 aaPredicted RBP14.65□□□□□ -0.06
RTN3-210ENST00000540798 GPR25O00155 361 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 RPL21P46778 160 aaKnown RBP14.65□□□□□ -0.06
RTN3-210ENST00000540798 KLF1Q13351 362 aaPredicted RBP14.65□□□□□ -0.06
RTN3-210ENST00000540798 ZSCAN26Q16670 478 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 TMEM192Q8IY95 271 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 THNSL1Q8IYQ7 743 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 KATNAL2Q8IYT4 538 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 ANKRD36BP1Q96IX9 119 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 CALCOCO1Q9P1Z2 691 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 SIX4Q9UIU6 781 aa14.65□□□□□ -0.06
RTN3-210ENST00000540798 TNNC2P02585 160 aa14.64□□□□□ -0.07
RTN3-210ENST00000540798 TMEM191BP0C7N4 346 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms