RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 WDR87Q6ZQQ6 2873 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 MYO15AQ9UKN7 3530 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 TULP1O00294 542 aaPredicted RBP18.05■□□□□ 0.48
UBC-208ENST00000540700 PDGFBP01127 241 aaPredicted RBP18.05■□□□□ 0.48
UBC-208ENST00000540700 SP100P23497 879 aaPredicted RBP18.05■□□□□ 0.48
UBC-208ENST00000540700 CLCNKBP51801 687 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 BCAR1P56945 870 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 CLDN10P78369 228 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 RNASELQ05823 741 aaKnown RBP18.05■□□□□ 0.48
UBC-208ENST00000540700 BFSP1Q12934 665 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 TUSC3Q13454 348 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 IQCB1Q15051 598 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 HSP90AA4PQ58FG1 418 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 SPOUT1Q5T280 376 aaKnown RBP18.05■□□□□ 0.48
UBC-208ENST00000540700 SPATA1Q5VX52 437 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 CD302Q8IX05 232 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 AOPEPQ8N6M6 819 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 C1orf127Q8N9H9 656 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 COLGALT1Q8NBJ5 622 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 APOL5Q9BWW9 433 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 MTMR12Q9C0I1 747 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 INTS13Q9NVM9 706 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 SIX4Q9UIU6 781 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 DERAQ9Y315 318 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 NFE2L3Q9Y4A8 694 aa18.05■□□□□ 0.48
UBC-208ENST00000540700 TDRD15B5MCY1 1934 aaKnown RBP18.04■□□□□ 0.48
UBC-208ENST00000540700 NRP1O14786 923 aa18.04■□□□□ 0.48
UBC-208ENST00000540700 EPB41P11171 864 aaKnown RBP18.04■□□□□ 0.48
UBC-208ENST00000540700 VAMP7P51809 220 aa18.04■□□□□ 0.48
UBC-208ENST00000540700 ZNF445P59923 1031 aa18.04■□□□□ 0.48
UBC-208ENST00000540700 TFAMQ00059 246 aaKnown RBP18.04■□□□□ 0.48
UBC-208ENST00000540700 PPP3CAQ08209 521 aa18.04■□□□□ 0.48
UBC-208ENST00000540700 LRSAM1Q6UWE0 723 aa18.04■□□□□ 0.48
UBC-208ENST00000540700 WDR49Q8IV35 697 aa18.04■□□□□ 0.48
UBC-208ENST00000540700 VN1R2Q8NFZ6 395 aa18.04■□□□□ 0.48
UBC-208ENST00000540700 TMC2Q8TDI7 906 aa18.04■□□□□ 0.48
UBC-208ENST00000540700 RSPH1Q8WYR4 309 aa18.04■□□□□ 0.48
UBC-208ENST00000540700 CNOT6LQ96LI5 555 aaKnown RBP18.04■□□□□ 0.48
UBC-208ENST00000540700 BPIFA3Q9BQP9 254 aa18.04■□□□□ 0.48
UBC-208ENST00000540700 CBX8Q9HC52 389 aa18.04■□□□□ 0.48
UBC-208ENST00000540700 UBQLN1Q9UMX0 589 aaKnown RBP18.04■□□□□ 0.48
UBC-208ENST00000540700 PRG3Q9Y2Y8 225 aaPredicted RBP18.04■□□□□ 0.48
UBC-208ENST00000540700 KIF4AO95239 1232 aa18.03■□□□□ 0.48
UBC-208ENST00000540700 C4BPAP04003 597 aaKnown RBP18.03■□□□□ 0.48
UBC-208ENST00000540700 LRPAP1P30533 357 aa18.03■□□□□ 0.48
UBC-208ENST00000540700 OR1G1P47890 313 aa18.03■□□□□ 0.48
UBC-208ENST00000540700 MARSP56192 900 aaKnown RBP18.03■□□□□ 0.48
UBC-208ENST00000540700 PTPN21Q16825 1174 aa18.03■□□□□ 0.48
UBC-208ENST00000540700 UPP1Q16831 310 aa18.03■□□□□ 0.48
UBC-208ENST00000540700 CDKAL1Q5VV42 579 aa18.03■□□□□ 0.48
UBC-208ENST00000540700 KCNT2Q6UVM3 1135 aa18.03■□□□□ 0.48
UBC-208ENST00000540700 INTS8Q75QN2 995 aaKnown RBP18.03■□□□□ 0.48
UBC-208ENST00000540700 SLC39A11Q8N1S5 342 aa18.03■□□□□ 0.48
UBC-208ENST00000540700 TMEM175Q9BSA9 504 aa18.03■□□□□ 0.48
UBC-208ENST00000540700 VN1R3Q9BXE9 311 aa18.03■□□□□ 0.48
UBC-208ENST00000540700 IRF2BPLQ9H1B7 796 aa18.03■□□□□ 0.48
UBC-208ENST00000540700 THAP9Q9H5L6 903 aa18.03■□□□□ 0.48
UBC-208ENST00000540700 FANCLQ9NW38 375 aa18.03■□□□□ 0.48
UBC-208ENST00000540700 CACNA1AO00555 2505 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 ANO9A1A5B4 782 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 PODXLO00592 558 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 LRRN2O75325 713 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 EFEMP2O95967 443 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 LAG3P18627 525 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 CYP3A5P20815 502 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 ZNF165P49910 485 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 MYL5Q02045 173 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 TDRD10Q5VZ19 366 aaKnown RBP18.02■□□□□ 0.48
UBC-208ENST00000540700 C15orf39Q6ZRI6 1047 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 FRMD5Q7Z6J6 570 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 TRIM59Q8IWR1 403 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 HASPINQ8TF76 798 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 SUSD6Q92537 303 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 SLC35C1Q96A29 364 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 ELMO3Q96BJ8 720 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 FAM193BQ96PV7 902 aaPredicted RBP18.02■□□□□ 0.48
UBC-208ENST00000540700 FNBP1Q96RU3 617 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 DPP3Q9NY33 737 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 ARMCX3Q9UH62 379 aaPredicted RBP18.02■□□□□ 0.48
UBC-208ENST00000540700 PCDHB12Q9Y5F1 795 aa18.02■□□□□ 0.48
UBC-208ENST00000540700 FAM186AA6NE01 2351 aa18.02■□□□□ 0.47
UBC-208ENST00000540700 PIRO00625 290 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 SPTLC1O15269 473 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 VNN1O95497 513 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 CST3P01034 146 aaPredicted RBP18.01■□□□□ 0.47
UBC-208ENST00000540700 ZNF18P17022 549 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 TNNI1P19237 187 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 GCLMP48507 274 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 SURF1Q15526 300 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 CCDC40Q4G0X9 1142 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 CBWD6Q4V339 395 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 DCAF17Q5H9S7 520 aaPredicted RBP18.01■□□□□ 0.47
UBC-208ENST00000540700 CBWD3Q5JTY5 395 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 CBWD5Q5RIA9 395 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 C9orf57Q5W0N0 161 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 TRAPPC11Q7Z392 1133 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 NT5DC4Q86YG4 428 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 BEST2Q8NFU1 509 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 ZNF558Q96NG5 402 aa18.01■□□□□ 0.47
UBC-208ENST00000540700 TSPAN18Q96SJ8 248 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms