RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 GTPBP10A4D1E9 387 aaKnown RBP11.43□□□□□ -0.58
ATL3-204ENST00000540699 NRP1O14786 923 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 FGF18O76093 207 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 IL18RAPO95256 599 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 ALDH2P05091 517 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 ITGB1P05556 798 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 CYP3A5P20815 502 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 CASP14P31944 242 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 ALDH7A1P49419 539 aaKnown RBP11.43□□□□□ -0.58
ATL3-204ENST00000540699 ADKP55263 362 aaKnown RBP11.43□□□□□ -0.58
ATL3-204ENST00000540699 SOX4Q06945 474 aaPredicted RBP11.43□□□□□ -0.58
ATL3-204ENST00000540699 GPM6BQ13491 265 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 GLRA4Q5JXX5 417 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 SPOUT1Q5T280 376 aaKnown RBP11.43□□□□□ -0.58
ATL3-204ENST00000540699 INTS8Q75QN2 995 aaKnown RBP11.43□□□□□ -0.58
ATL3-204ENST00000540699 PPFIBP1Q86W92 1011 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 TMEM173Q86WV6 379 aaPredicted RBP11.43□□□□□ -0.58
ATL3-204ENST00000540699 NT5DC4Q86YG4 428 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 CBWD2Q8IUF1 395 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 CNGA4Q8IV77 575 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 RNF168Q8IYW5 571 aaPredicted RBP11.43□□□□□ -0.58
ATL3-204ENST00000540699 CCDC112Q8NEF3 446 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 SPPL3Q8TCT6 385 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 BCL7CQ8WUZ0 217 aaPredicted RBP11.43□□□□□ -0.58
ATL3-204ENST00000540699 SAAL1Q96ER3 474 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 IGSF21Q96ID5 467 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 MFSD14AQ96MC6 490 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 UROC1Q96N76 676 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 FAM193BQ96PV7 902 aaPredicted RBP11.43□□□□□ -0.58
ATL3-204ENST00000540699 PANX2Q96RD6 677 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 LMAN2LQ9H0V9 348 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 MARCH5Q9NX47 278 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 MTUS1Q9ULD2 1270 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 CAPN11Q9UMQ6 739 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 C2CD2Q9Y426 696 aa11.43□□□□□ -0.58
ATL3-204ENST00000540699 C5orf42Q9H799 3197 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 GOLGA8IPA6NC78 632 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 ZNF233A6NK53 670 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 GOLGA8JA6NMD2 632 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 TMEM189-UBE2V1I3L0A0 370 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 EPHB6O15197 1021 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 GRM6O15303 877 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 PMM2O15305 246 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 NOL4O94818 638 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 DNAJB1P25685 340 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 LRPAP1P30533 357 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 PBX3P40426 434 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 VAMP7P51809 220 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 WNT7BP56706 349 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 CAMK1Q14012 370 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 SNRNP35Q16560 246 aaKnown RBP11.42□□□□□ -0.58
ATL3-204ENST00000540699 UPP1Q16831 310 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 DCAF17Q5H9S7 520 aaPredicted RBP11.42□□□□□ -0.58
ATL3-204ENST00000540699 KIAA1524Q8TCG1 905 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 HLA-CQ95604 372 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 DNAJC7Q99615 494 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 PAAF1Q9BRP4 392 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 VN1R3Q9BXE9 311 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 EDEM3Q9BZQ6 932 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 GANQ9H2C0 597 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 ABHD10Q9NUJ1 306 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 RBAKQ9NYW8 714 aaPredicted RBP11.42□□□□□ -0.58
ATL3-204ENST00000540699 STK39Q9UEW8 545 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 UBQLN1Q9UMX0 589 aaKnown RBP11.42□□□□□ -0.58
ATL3-204ENST00000540699 FAN1Q9Y2M0 1017 aa11.42□□□□□ -0.58
ATL3-204ENST00000540699 NT5C1B-RDH14C9J2C7 533 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 XPOTO43592 962 aaKnown RBP11.41□□□□□ -0.58
ATL3-204ENST00000540699 NFICP08651 508 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 TPM1P09493 284 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 TRIM49P0CI25 452 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 TRIM49CP0CI26 452 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 SKILP12757 684 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 KRT13P13646 458 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 RPL9P32969 192 aaKnown RBP11.41□□□□□ -0.58
ATL3-204ENST00000540699 FMO5P49326 533 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 DLG4P78352 724 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 CYP24A1Q07973 514 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 TMEM132DQ14C87 1099 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 PSMD6Q15008 389 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 SURF1Q15526 300 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 CBWD6Q4V339 395 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 CBWD3Q5JTY5 395 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 CBWD5Q5RIA9 395 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 TCERG1LQ5VWI1 586 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 JADE1Q6IE81 842 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 CD300LGQ6UXG3 332 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 DDX53Q86TM3 631 aaKnown RBP11.41□□□□□ -0.58
ATL3-204ENST00000540699 EFCAB13Q8IY85 973 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 RDH13Q8NBN7 331 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 TMC2Q8TDI7 906 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 PARD3BQ8TEW8 1205 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 CPLX3Q8WVH0 158 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 BAP1Q92560 729 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 C18orf25Q96B23 403 aaPredicted RBP11.41□□□□□ -0.58
ATL3-204ENST00000540699 MRPL38Q96DV4 380 aaKnown RBP11.41□□□□□ -0.58
ATL3-204ENST00000540699 KIF12Q96FN5 646 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 DDX27Q96GQ7 796 aaKnown RBP11.41□□□□□ -0.58
ATL3-204ENST00000540699 TMEM169Q96HH4 297 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 LRFN3Q9BTN0 628 aa11.41□□□□□ -0.58
ATL3-204ENST00000540699 COLEC11Q9BWP8 271 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms