RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 ALCAMQ13740 583 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 DSTYKQ6XUX3 929 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 PDILTQ8N807 584 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 POMGNT1Q8WZA1 660 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 IRF2BPLQ9H1B7 796 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 TBC1D7Q9P0N9 293 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 PCDHB13Q9Y5F0 798 aa22.74■■□□□ 1.23
CHFR-217ENST00000540537 PPEF2O14830 753 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 GCNT3O95395 438 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 CPB1P15086 417 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 PTPN2P17706 415 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 KCNA1Q09470 495 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 C9orf57Q5W0N0 161 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 PARM1Q6UWI2 310 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 USP37Q86T82 979 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 NPAS3Q8IXF0 933 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 FLCNQ8NFG4 579 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 FGF14Q92915 247 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 IKZF4Q9H2S9 585 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 SLC2A4RGQ9NR83 387 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 PANK4Q9NVE7 773 aa22.73■■□□□ 1.23
CHFR-217ENST00000540537 TFIP11Q9UBB9 837 aaKnown RBP22.73■■□□□ 1.23
CHFR-217ENST00000540537 MRPS23Q9Y3D9 190 aaKnown RBP22.73■■□□□ 1.23
CHFR-217ENST00000540537 TIMM13Q9Y5L4 95 aaPredicted RBP22.73■■□□□ 1.23
CHFR-217ENST00000540537 SCN1AP35498 2009 aa22.72■■□□□ 1.23
CHFR-217ENST00000540537 ANO9A1A5B4 782 aa22.72■■□□□ 1.23
CHFR-217ENST00000540537 OR6C75A6NL08 312 aa22.72■■□□□ 1.23
CHFR-217ENST00000540537 PIRO00625 290 aa22.72■■□□□ 1.23
CHFR-217ENST00000540537 HSP90AA1P07900 732 aaKnown RBP22.72■■□□□ 1.23
CHFR-217ENST00000540537 AOC1P19801 751 aa22.72■■□□□ 1.23
CHFR-217ENST00000540537 LILRA4P59901 499 aa22.72■■□□□ 1.23
CHFR-217ENST00000540537 ADCY1Q08828 1119 aa22.72■■□□□ 1.23
CHFR-217ENST00000540537 E2F4Q16254 413 aa22.72■■□□□ 1.23
CHFR-217ENST00000540537 CRELD2Q6UXH1 353 aaPredicted RBP22.72■■□□□ 1.23
CHFR-217ENST00000540537 ALYREFQ86V81 257 aaKnown RBP22.72■■□□□ 1.23
CHFR-217ENST00000540537 RTP3Q9BQQ7 232 aa22.72■■□□□ 1.23
CHFR-217ENST00000540537 LRRC27Q9C0I9 530 aa22.72■■□□□ 1.23
CHFR-217ENST00000540537 TNMDQ9H2S6 317 aa22.72■■□□□ 1.23
CHFR-217ENST00000540537 CUEDC2Q9H467 287 aa22.72■■□□□ 1.23
CHFR-217ENST00000540537 GDE1Q9NZC3 331 aa22.72■■□□□ 1.23
CHFR-217ENST00000540537 KRBA1A5PL33 1030 aa22.71■■□□□ 1.23
CHFR-217ENST00000540537 CUTAO60888 179 aa22.71■■□□□ 1.23
CHFR-217ENST00000540537 IL18RAPO95256 599 aa22.71■■□□□ 1.23
CHFR-217ENST00000540537 ZSCAN22P10073 491 aaPredicted RBP22.71■■□□□ 1.23
CHFR-217ENST00000540537 ODC1P11926 461 aa22.71■■□□□ 1.23
CHFR-217ENST00000540537 MRE11P49959 708 aa22.71■■□□□ 1.23
CHFR-217ENST00000540537 CASP5P51878 434 aa22.71■■□□□ 1.23
CHFR-217ENST00000540537 SLC5A9Q2M3M2 681 aa22.71■■□□□ 1.23
CHFR-217ENST00000540537 OVOS1Q6IE37 1185 aa22.71■■□□□ 1.23
CHFR-217ENST00000540537 RNF19BQ6ZMZ0 732 aa22.71■■□□□ 1.23
CHFR-217ENST00000540537 NT5DC4Q86YG4 428 aa22.71■■□□□ 1.23
CHFR-217ENST00000540537 CCDC65Q8IXS2 484 aa22.71■■□□□ 1.23
CHFR-217ENST00000540537 GPR152Q8TDT2 470 aa22.71■■□□□ 1.23
CHFR-217ENST00000540537 SENP8Q96LD8 212 aa22.71■■□□□ 1.23
CHFR-217ENST00000540537 RPP25Q9BUL9 199 aaKnown RBP22.71■■□□□ 1.23
CHFR-217ENST00000540537 SPTLC1O15269 473 aa22.7■■□□□ 1.22
CHFR-217ENST00000540537 F13A1P00488 732 aa22.7■■□□□ 1.22
CHFR-217ENST00000540537 GARTP22102 1010 aa22.7■■□□□ 1.22
CHFR-217ENST00000540537 MYBPC2Q14324 1141 aa22.7■■□□□ 1.22
CHFR-217ENST00000540537 FOXD4L5Q5VV16 416 aaPredicted RBP22.7■■□□□ 1.22
CHFR-217ENST00000540537 ELMOD1Q8N336 334 aa22.7■■□□□ 1.22
CHFR-217ENST00000540537 ST13P5Q8NFI4 369 aaPredicted RBP22.7■■□□□ 1.22
CHFR-217ENST00000540537 FOXD4L4Q8WXT5 416 aaPredicted RBP22.7■■□□□ 1.22
CHFR-217ENST00000540537 ING5Q8WYH8 240 aa22.7■■□□□ 1.22
CHFR-217ENST00000540537 CORO1BQ9BR76 489 aa22.7■■□□□ 1.22
CHFR-217ENST00000540537 KBTBD4Q9NVX7 518 aa22.7■■□□□ 1.22
CHFR-217ENST00000540537 TSC2P49815 1807 aa22.7■■□□□ 1.22
CHFR-217ENST00000540537 ZNF197O14709 1029 aa22.69■■□□□ 1.22
CHFR-217ENST00000540537 MICAL2O94851 1124 aa22.69■■□□□ 1.22
CHFR-217ENST00000540537 TWF1Q12792 350 aa22.69■■□□□ 1.22
CHFR-217ENST00000540537 GPR17Q13304 367 aa22.69■■□□□ 1.22
CHFR-217ENST00000540537 PRSS36Q5K4E3 855 aa22.69■■□□□ 1.22
CHFR-217ENST00000540537 IQCEQ6IPM2 695 aa22.69■■□□□ 1.22
CHFR-217ENST00000540537 SYCP3Q8IZU3 236 aa22.69■■□□□ 1.22
CHFR-217ENST00000540537 FGFBP2Q9BYJ0 223 aa22.69■■□□□ 1.22
CHFR-217ENST00000540537 TMEM206Q9H813 350 aa22.69■■□□□ 1.22
CHFR-217ENST00000540537 ARHGEF3Q9NR81 526 aa22.69■■□□□ 1.22
CHFR-217ENST00000540537 DPP3Q9NY33 737 aa22.69■■□□□ 1.22
CHFR-217ENST00000540537 CA14Q9ULX7 337 aa22.69■■□□□ 1.22
CHFR-217ENST00000540537 VNN2O95498 520 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 LDHAP00338 332 aaKnown RBP22.68■■□□□ 1.22
CHFR-217ENST00000540537 CYP11A1P05108 521 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 OR4Q2P0C623 313 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 CEBPBP17676 345 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 TAF6P49848 677 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 AMPD3Q01432 767 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 ATL3Q6DD88 541 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 SHC4Q6S5L8 630 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 PDZD4Q76G19 769 aaPredicted RBP22.68■■□□□ 1.22
CHFR-217ENST00000540537 BRSK2Q8IWQ3 736 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 EFCAB13Q8IY85 973 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 IQUBQ8NA54 791 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 KCNG4Q8TDN1 519 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 ZNF512Q96ME7 567 aaPredicted RBP22.68■■□□□ 1.22
CHFR-217ENST00000540537 FAM213AQ9BRX8 229 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 TRIM9Q9C026 710 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 CEP72Q9P209 647 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 DSEQ9UL01 958 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 YIPF1Q9Y548 306 aa22.68■■□□□ 1.22
CHFR-217ENST00000540537 TCHHQ07283 1943 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms