RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 KMT5BQ4FZB7 885 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 CCDC149Q6ZUS6 474 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 DDX53Q86TM3 631 aaKnown RBP12.42□□□□□ -0.42
TMEM258-205ENST00000540434 CCDC65Q8IXS2 484 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 RNF168Q8IYW5 571 aaPredicted RBP12.42□□□□□ -0.42
TMEM258-205ENST00000540434 VPS52Q8N1B4 723 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 SLC44A3Q8N4M1 653 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 GPR161Q8N6U8 529 aaKnown RBP12.42□□□□□ -0.42
TMEM258-205ENST00000540434 KIAA0895Q8NCT3 520 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 ZNF507Q8TCN5 953 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 HASPINQ8TF76 798 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 FAM193BQ96PV7 902 aaPredicted RBP12.42□□□□□ -0.42
TMEM258-205ENST00000540434 CBWD1Q9BRT8 395 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 TMEM175Q9BSA9 504 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 CHMP5Q9NZZ3 219 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 SEL1LQ9UBV2 794 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 KCNG1Q9UIX4 513 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 CPSF3Q9UKF6 684 aaKnown RBP12.42□□□□□ -0.42
TMEM258-205ENST00000540434 ANGPTL2Q9UKU9 493 aa12.42□□□□□ -0.42
TMEM258-205ENST00000540434 VWA8A3KMH1 1905 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.41□□□□□ -0.42
TMEM258-205ENST00000540434 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.41□□□□□ -0.42
TMEM258-205ENST00000540434 GOLGA8IPA6NC78 632 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 GOLGA8JA6NMD2 632 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 H0YCG3 227 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 I3L4J1 428 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 OGTO15294 1046 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 NR1I2O75469 434 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 KIF4AO95239 1232 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 THP07101 528 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 ADRB2P07550 413 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 CTSAP10619 480 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 KCNE1P15382 129 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 MATR3P43243 847 aaKnown RBP eCLIP12.41□□□□□ -0.42
TMEM258-205ENST00000540434 CLCNKBP51801 687 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 AMPD3Q01432 767 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 SPEM2Q0P670 501 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 DPYDQ12882 1025 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 TUSC3Q13454 348 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 ZBTB6Q15916 424 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 FAM26FQ5R3K3 315 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 PHLDB3Q6NSJ2 640 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 TSSK4Q6SA08 328 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 CEP57L1Q8IYX8 460 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 SAAL1Q96ER3 474 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 ACCSQ96QU6 501 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 MSTO1Q9BUK6 570 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 CCDC94Q9BW85 323 aaPredicted RBP12.41□□□□□ -0.42
TMEM258-205ENST00000540434 PCIF1Q9H4Z3 704 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 SFXN1Q9H9B4 322 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 CNTN3Q9P232 1028 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 TUBGCP4Q9UGJ1 667 aa12.41□□□□□ -0.42
TMEM258-205ENST00000540434 PVALEFA0A1B0GWK0 134 aa12.4□□□□□ -0.42
TMEM258-205ENST00000540434 PPEF2O14830 753 aa12.4□□□□□ -0.42
TMEM258-205ENST00000540434 SLC30A4O14863 429 aa12.4□□□□□ -0.42
TMEM258-205ENST00000540434 GDF9O60383 454 aa12.4□□□□□ -0.42
TMEM258-205ENST00000540434 PNOCQ13519 176 aa12.4□□□□□ -0.42
TMEM258-205ENST00000540434 N4BP2L1Q5TBK1 243 aaPredicted RBP12.4□□□□□ -0.42
TMEM258-205ENST00000540434 NELFCDQ8IXH7 590 aa12.4□□□□□ -0.42
TMEM258-205ENST00000540434 HACE1Q8IYU2 909 aa12.4□□□□□ -0.42
TMEM258-205ENST00000540434 PJA1Q8NG27 643 aa12.4□□□□□ -0.42
TMEM258-205ENST00000540434 TMEM169Q96HH4 297 aa12.4□□□□□ -0.42
TMEM258-205ENST00000540434 RPS6KC1Q96S38 1066 aa12.4□□□□□ -0.42
TMEM258-205ENST00000540434 MAGEF1Q9HAY2 307 aa12.4□□□□□ -0.42
TMEM258-205ENST00000540434 ARHGEF3Q9NR81 526 aa12.4□□□□□ -0.42
TMEM258-205ENST00000540434 SPATA6Q9NWH7 488 aaPredicted RBP12.4□□□□□ -0.42
TMEM258-205ENST00000540434 AGO2Q9UKV8 859 aaKnown RBP12.4□□□□□ -0.42
TMEM258-205ENST00000540434 MTF2Q9Y483 593 aaPredicted RBP12.4□□□□□ -0.42
TMEM258-205ENST00000540434 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.42
TMEM258-205ENST00000540434 CLIC2O15247 247 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 SPTLC1O15269 473 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 RPN1P04843 607 aaKnown RBP12.39□□□□□ -0.43
TMEM258-205ENST00000540434 NFICP08651 508 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 CLTAP09496 248 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 SRFP11831 508 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 PMLP29590 882 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 GBP2P32456 591 aaPredicted RBP12.39□□□□□ -0.43
TMEM258-205ENST00000540434 BRCC3P46736 316 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
TMEM258-205ENST00000540434 BMS1Q14692 1282 aaKnown RBP12.39□□□□□ -0.43
TMEM258-205ENST00000540434 PTPN14Q15678 1187 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 UPP1Q16831 310 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 C15orf39Q6ZRI6 1047 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 HVCN1Q96D96 273 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 MYADMQ96S97 322 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 LRRC27Q9C0I9 530 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 CHST7Q9NS84 486 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 ADAM28Q9UKQ2 775 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 ZMIZ1Q9ULJ6 1067 aa12.39□□□□□ -0.43
TMEM258-205ENST00000540434 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 C1QTNF9BB2RNN3 333 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 C2CD2LO14523 706 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 ADAM12O43184 909 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 LAMTOR5O43504 91 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 SOD2P04179 222 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 CNPP09543 421 aaKnown RBP12.38□□□□□ -0.43
TMEM258-205ENST00000540434 C1QTNF9P0C862 333 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 RPL17P18621 184 aaKnown RBP12.38□□□□□ -0.43
TMEM258-205ENST00000540434 CLCN4P51793 760 aa12.38□□□□□ -0.43
TMEM258-205ENST00000540434 YARSP54577 528 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms