RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 TFAMQ00059 246 aaKnown RBP16.3■□□□□ 0.2
UBE3B-212ENST00000540230 CTXN3Q4LDR2 81 aa16.3■□□□□ 0.2
UBE3B-212ENST00000540230 DSTYKQ6XUX3 929 aa16.3■□□□□ 0.2
UBE3B-212ENST00000540230 C1orf127Q8N9H9 656 aa16.3■□□□□ 0.2
UBE3B-212ENST00000540230 SMG7Q92540 1137 aaKnown RBP16.3■□□□□ 0.2
UBE3B-212ENST00000540230 SENP8Q96LD8 212 aa16.3■□□□□ 0.2
UBE3B-212ENST00000540230 C11orf16Q9NQ32 467 aa16.3■□□□□ 0.2
UBE3B-212ENST00000540230 ZDHHC7Q9NXF8 308 aa16.3■□□□□ 0.2
UBE3B-212ENST00000540230 DPP7Q9UHL4 492 aa16.3■□□□□ 0.2
UBE3B-212ENST00000540230 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.3■□□□□ 0.2
UBE3B-212ENST00000540230 CYP2J2P51589 502 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 KNOP1Q1ED39 458 aaKnown RBP16.29■□□□□ 0.2
UBE3B-212ENST00000540230 ZNF280DQ6N043 979 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 FMR1NBQ8N0W7 255 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-212ENST00000540230 RDH13Q8NBN7 331 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 APPL2Q8NEU8 664 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 CXorf38Q8TB03 319 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 SLC7A14Q8TBB6 771 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 BORCS6Q96GS4 357 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 PRKD2Q9BZL6 878 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 DOCK8Q8NF50 2099 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 FAM86C2PA6NEL3 165 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 H7C4K7 107 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 KIAA0391O15091 583 aaKnown RBP16.29■□□□□ 0.2
UBE3B-212ENST00000540230 N4BP1O75113 896 aaKnown RBP16.29■□□□□ 0.2
UBE3B-212ENST00000540230 ABLIM3O94929 683 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 ITGB3P05106 788 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 MYL1P05976 194 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 OR4Q2P0C623 313 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 POLR2BP30876 1174 aaKnown RBP16.29■□□□□ 0.2
UBE3B-212ENST00000540230 YWHAHQ04917 246 aaPredicted RBP16.29■□□□□ 0.2
UBE3B-212ENST00000540230 SNW1Q13573 536 aaKnown RBP16.29■□□□□ 0.2
UBE3B-212ENST00000540230 LIN9Q5TKA1 542 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 CCDC149Q6ZUS6 474 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 NT5DC4Q86YG4 428 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 ENGASEQ8NFI3 743 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 OR5B17Q8NGF7 314 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 TMEM209Q96SK2 561 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 MTMR12Q9C0I1 747 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 WDR6Q9NNW5 1121 aaKnown RBP16.29■□□□□ 0.2
UBE3B-212ENST00000540230 MYO10Q9HD67 2058 aa16.29■□□□□ 0.2
UBE3B-212ENST00000540230 NOTCH4Q99466 2003 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 ZNF233A6NK53 670 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 CCL16O15467 120 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 DCXO43602 365 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 OAZ2O95190 189 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 SEC24AO95486 1093 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 TAF6P49848 677 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 NTHL1P78549 312 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 PSMD2Q13200 908 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 SNRNP35Q16560 246 aaKnown RBP16.28■□□□□ 0.2
UBE3B-212ENST00000540230 PPM1LQ5SGD2 360 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 ELMSAN1Q6PJG2 1045 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 HS2ST1Q7LGA3 356 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 ZNF461Q8TAF7 563 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 RHOBTB2Q9BYZ6 727 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 GZF1Q9H116 711 aaPredicted RBP16.28■□□□□ 0.2
UBE3B-212ENST00000540230 KCTD10Q9H3F6 313 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 SIX4Q9UIU6 781 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 CLUHO75153 1309 aa16.28■□□□□ 0.2
UBE3B-212ENST00000540230 RHOBTB3O94955 611 aa16.27■□□□□ 0.2
UBE3B-212ENST00000540230 VNN2O95498 520 aa16.27■□□□□ 0.2
UBE3B-212ENST00000540230 TYMPP19971 482 aa16.27■□□□□ 0.2
UBE3B-212ENST00000540230 PNOCQ13519 176 aa16.27■□□□□ 0.2
UBE3B-212ENST00000540230 OVOS1Q6IE37 1185 aa16.27■□□□□ 0.2
UBE3B-212ENST00000540230 RNF19BQ6ZMZ0 732 aa16.27■□□□□ 0.2
UBE3B-212ENST00000540230 C12orf56Q8IXR9 622 aa16.27■□□□□ 0.2
UBE3B-212ENST00000540230 TDRD5Q8NAT2 981 aaKnown RBP16.27■□□□□ 0.2
UBE3B-212ENST00000540230 XXYLT1Q8NBI6 393 aa16.27■□□□□ 0.2
UBE3B-212ENST00000540230 PIDD1Q9HB75 910 aa16.27■□□□□ 0.2
UBE3B-212ENST00000540230 INTS13Q9NVM9 706 aa16.27■□□□□ 0.2
UBE3B-212ENST00000540230 HCFC1R1Q9NWW0 138 aa16.27■□□□□ 0.2
UBE3B-212ENST00000540230 CIZ1Q9ULV3 898 aaPredicted RBP16.27■□□□□ 0.2
UBE3B-212ENST00000540230 AGAP1Q9UPQ3 857 aa16.27■□□□□ 0.2
UBE3B-212ENST00000540230 NR2E1Q9Y466 385 aa16.27■□□□□ 0.2
UBE3B-212ENST00000540230 GADD45BO75293 160 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-212ENST00000540230 ASGR2P07307 311 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 ODC1P11926 461 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 CPB1P15086 417 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 ATF2P15336 505 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 HOXA9P31269 272 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 CDR1P51861 262 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 CYP26C1Q6V0L0 522 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 GRASPQ7Z6J2 395 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-212ENST00000540230 USP37Q86T82 979 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 CSGALNACT2Q8N6G5 542 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 OR10T2Q8NGX3 314 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 PLEKHO2Q8TD55 490 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 ERCC4Q92889 916 aaPredicted RBP16.26■□□□□ 0.19
UBE3B-212ENST00000540230 MYADMQ96S97 322 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 RTP3Q9BQQ7 232 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 CRISPLD1Q9H336 500 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 POLIQ9UNA4 740 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 MAPK8IP1Q9UQF2 711 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 USTQ9Y2C2 406 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 TECTAO75443 2155 aa16.26■□□□□ 0.19
UBE3B-212ENST00000540230 GOLGA6L4A6NEF3 574 aa16.25■□□□□ 0.19
UBE3B-212ENST00000540230 KPNA7A9QM74 516 aa16.25■□□□□ 0.19
UBE3B-212ENST00000540230 CYB561D2O14569 222 aa16.25■□□□□ 0.19
UBE3B-212ENST00000540230 CYP11A1P05108 521 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms